Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2530 |
Symbol | |
ID | 5191618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2877707 |
End bp | 2878372 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586983 |
Product | TenA family transcription regulator |
Protein accession | YP_001267849 |
Protein GI | 148547747 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGG ATATCTTCGA GCGCCTCAAG ACAGCTGCCT CGCCACAATG GAACCGCTAC GTAGACCATG ACTTCGTGCG TCAAATGGGC GAGGGCACGC TAAGCGAGGA AGCGTTCCGG ACCTACCTTG TGCAGGATTA CCTGTTCCTG ATCCAGTTCG CCCGCGCCTG GGCGTTGGCT GCCTACAAAA GCCGCCGCCC GGCCGACATT CGCGCGGCGC AGGCCGGGCT GGCGGCGATC CTGGATGAAA CCGAGCTGCA CTTGCGCCTG TGCGCGCGCT GGGGCTTGAC CCAGGCAGAC ATCGAGGCCG CGCCAGAGCA TCAGGCCACG GTGGCATACA CCCGCTATGT GCTGGACTGC GGCGCAGCCG GCGACCTGCT GGAGCTGCAC GTGGCACTGG CACCTTGCGT GATCGGCTAT GCCGAAATCG GCCGGACCCT GGCCGAGCGT ATTGGCGACT TGAGCAATCA CCCCTACCGC GAGTGGATTG GCGAGTATGC CGGGGAGGGC TACCAAGGGG TGGCCGCAGC AGCGCGCAAG CACCTGGATG AACTGGCGGC GCGCAGCATG ACCGAGCAGC GGTTCGCCGA ACTGGCAGGG ATTTTTGGCC AGGCCTCCAG CCTGGAGGCT GATTTCTGGC AAATGGGGTT GGACGGGACC GTGTAA
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Protein sequence | MSMDIFERLK TAASPQWNRY VDHDFVRQMG EGTLSEEAFR TYLVQDYLFL IQFARAWALA AYKSRRPADI RAAQAGLAAI LDETELHLRL CARWGLTQAD IEAAPEHQAT VAYTRYVLDC GAAGDLLELH VALAPCVIGY AEIGRTLAER IGDLSNHPYR EWIGEYAGEG YQGVAAAARK HLDELAARSM TEQRFAELAG IFGQASSLEA DFWQMGLDGT V
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