| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2526 |
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| Symbol | |
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| ID | 5193699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2872792 |
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| End bp | 2873739 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586979 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001267845 |
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| Protein GI | 148547743 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0910957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTTT TCAGCAAGGC GCAGATCATC GCCCGCTTCA ACCCCGAGCT CGCGGTCAGC
CAACTGGAGG AAGGCTTCAT CGCCTATTCC GAAGGCAAGG TGCAGGTGCC GCCCGTGCAG
GGCTTCGCAT TCAAGGGCGC GAACGGTGAC TGTTGCGTGA AGTCGGCCTA CATCGAAGGC
AGCCCGACCT TCACCGTAAA GCTTTCGACA GGCTTCTACG ACAACCCGTC CAAGGGCCTG
CCGAGCAATG ACGGCCTGAT GCTTGTGTTG TCTGCACACA CCGGTCAGCC GCTGGCACTG
CTGCAGGACC AAGGCTGGCT GACTGCCATG CGCACCGCGT TGGCCGGGCG TATCGCCGCC
CGGCTGCTGG CGCCGGCCCA GGTCAAGGCC ATTGGTATCC TCGGCACCGG CATGCAGGCG
CAGATGCAGC TTGAGCAGCT TCGCGCGGTG ACCGATTGCC GCCAGGTCAT TGTCTGGGGC
CGGCATGAAC GCGGGCTTGC GGCCTATACC GCATTTGCCC GCGAACTGGG CTTCGGGGTG
CACAGCACGC AGGATGCTGC CGAGGTTGCG GGCGCTGCAA ACCTGATCGT CTGCACCACC
CCTTCTCGCC AGGCGCTGTT GCACAGTGAT TGGGTCCAGC CGGGTACGCA TATCACCGCC
GTCGGTGCCG ATGCGCCCGG CAAGCAGGAA CTGGACCCGG CACTGGTGGC CAGGGCAGAC
CGTATCATCG TCGACGCCAT CGCCCAGTGC AGCCAGTACG GCGAAGTGGC CCATGCCCTC
GGCAGTGGCC AGATCAACGC TCACCAGCTG ATCGAGCTGG GTACGCTGCT GGCTGGCCGC
GCCAAGGGGC GTGAGCACGA CGGCCAGATT ACCTTGGCGG ACCTGACCGG TGTGGCAGTG
CAGGATGCAC AAATCGCAAG CTACGCCTTG GCAGCCCTGT GCACCTGA
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| Protein sequence | MRVFSKAQII ARFNPELAVS QLEEGFIAYS EGKVQVPPVQ GFAFKGANGD CCVKSAYIEG
SPTFTVKLST GFYDNPSKGL PSNDGLMLVL SAHTGQPLAL LQDQGWLTAM RTALAGRIAA
RLLAPAQVKA IGILGTGMQA QMQLEQLRAV TDCRQVIVWG RHERGLAAYT AFARELGFGV
HSTQDAAEVA GAANLIVCTT PSRQALLHSD WVQPGTHITA VGADAPGKQE LDPALVARAD
RIIVDAIAQC SQYGEVAHAL GSGQINAHQL IELGTLLAGR AKGREHDGQI TLADLTGVAV
QDAQIASYAL AALCT
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