Gene Pput_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2524 
Symbol 
ID5191731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2871069 
End bp2871674 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content59% 
IMG OID640586977 
ProductYheO domain-containing protein 
Protein accessionYP_001267843 
Protein GI148547741 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0563238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG AAAACTACAA GGCAATCGCC GACAGCATCG CCCTGCTGCT GTATCCGCAC 
GCTGAAGTCA TCGTCCATGA GCTGCACAGC CAGACGGTCG TGCACATCGC CAACAACTTC
TCCCGGCGCA AGCTGGGCGA TGATTCGGCG ATCGATCACG AACTGGACGA TGTGCTTGCC
GGTGCCAACC TTGGCCCTTA CGAGAAGCTC AACTGGAACG GCCAGAAGAT CCGCTCCATC
AGTACCGTAC TGCGCGACTC GCAGGGCGAC CCCGAATACC TGATGTGCAT CAATCTGAAC
GTGTCAGTAC TGGAGCAAGC CCGCGTGGCA CTCGATGCGT TCTTCCAGAT GAGCCGGCTG
GTACCGCAAC CTGACTCGCT GTTCCGCAAC GACTGGCAGG AACGCATCAA CACGTTTCTG
CATGCCTGGC TGCAAGCGCG CGGCTTATCG CTGCAGACGC TACAGATGAA AGACAAGCGC
AGCCTGGTGC AGGCGCTGTA CGCTGAAGGC GCGTTCGAAG GGCGAAGTGG TGCTGACTAT
GTCGCCAACG TTCTGAGCAT GGGGCGGGCC ACCGTGTACA AGTACCTGAA AGAGCTCAAG
GGCTAA
 
Protein sequence
MTLENYKAIA DSIALLLYPH AEVIVHELHS QTVVHIANNF SRRKLGDDSA IDHELDDVLA 
GANLGPYEKL NWNGQKIRSI STVLRDSQGD PEYLMCINLN VSVLEQARVA LDAFFQMSRL
VPQPDSLFRN DWQERINTFL HAWLQARGLS LQTLQMKDKR SLVQALYAEG AFEGRSGADY
VANVLSMGRA TVYKYLKELK G