| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2515 |
|---|
| Symbol | |
|---|
| ID | 5191828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2862538 |
|---|
| End bp | 2863431 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640586968 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001267834 |
|---|
| Protein GI | 148547732 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.930351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT CGCCCCTGCT CACTGCGTTT CTGCCGCTTG CACTGGGCAT CATCATGCTT
GGCCTTGGGT TGTCGCTGAC CCTGGCTGAC TTCGCTCGCG TGGTGAAATA CCCAAAGCCC
GTGGTGGTGG GCCTGGTGTG CCAGATCCTG CTGTTGCCGC TGGTGTGCTT CCTGATTGCC
AACGGCTTTG GCCTGGAATC TGCCCTGGCA GTGGGGTTGA TGCTGCTGGC GGCTTCGCCG
GGCGGTACCA CGGCCAACCT GTTCAGCCAT CTGGCCCACG GTGACGTGGC GTTGAACATC
ACCCTGACGG CGGTCAACTC ACTGATCGCG ATCCTGACCA TGCCGTTGCT GGTGAACCTG
TCGCTGAGCT GGTTCATGGC CTCGGACCAG GCTATTCCAC TGCAGTTCGC CAAGGTCATG
CAGGTGTTCG CCATCGTCTT GCTGCCGGTG GCGCTGGGCA TGCTGATTCG CCATTTTGCC
CCGGCATTCG CTGCGCGTAT GGAGAAACCG ATGAAGCTGG TGGCTGCGCT GTTCCTGGCC
TTCACCATCG TCCTGGCACT GGCCAAGGAC TGGCAGACAG TGGTCGAGTA CGCACCGGTG
GTGGGCCTGG CGGCGCTGCT GTTCAACCTG CTGAGCCTGA CGGTGGGCTA TTGGGTGCCG
CGGTTGTTGA ACATTCCCAA GCGCCAGGCG ATTGCCATTG GTATGGAAAT TGGCATCCAT
AACGGGACCT TGGCGATTGC CCTGGCGTTG AGCCCTTCGC TGCTGAACAA CGCGACCATG
GCGGTGCCGG CTGCGTTGTA CAGCTTGATC ATGTTCTTTA CTGCGGCCGG GTTTGGCTGG
TGGGTGAGCC GCGGGCATGT GGCGGCAGAG CCCAAAGGTG AAACCGTGAA CTGA
|
|---|
| Protein sequence | MTASPLLTAF LPLALGIIML GLGLSLTLAD FARVVKYPKP VVVGLVCQIL LLPLVCFLIA
NGFGLESALA VGLMLLAASP GGTTANLFSH LAHGDVALNI TLTAVNSLIA ILTMPLLVNL
SLSWFMASDQ AIPLQFAKVM QVFAIVLLPV ALGMLIRHFA PAFAARMEKP MKLVAALFLA
FTIVLALAKD WQTVVEYAPV VGLAALLFNL LSLTVGYWVP RLLNIPKRQA IAIGMEIGIH
NGTLAIALAL SPSLLNNATM AVPAALYSLI MFFTAAGFGW WVSRGHVAAE PKGETVN
|
|---|
| |