Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2489 |
Symbol | |
ID | 5191770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2838193 |
End bp | 2840247 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586942 |
Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
Protein accession | YP_001267808 |
Protein GI | 148547706 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases [COG2030] Acyl dehydratase |
TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.997274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCCG CCCCTACTCT GCAAAGTTTC ATCGCCGGCC GTTGGCTAGG CCAGCACGGC GCCCAGGCCC TGCGCAGCGC CCTCGACGGT CACGTACTGG CCTACAGCCA TGAAGAGCGC CCGGACTTCG CCGAAGCTGT GGACTACGCG CGTGCACGCG GTCTTGCCTC GCTGATGGGC ATGGATTTCC AACAACGTGC CCAGCGCCTC AAAGCCCTGG CCCTGTACCT GGCCGACCAC AAGGAGCAGC TCTACGCCCT GTCGCACCAC AGCGGCGCCA CCCGGGCCGA CAGCTGGATC GATATCGAAG GCGGCAACGC CACGCTGTTC TCCTATGCCG GCATCGGCAG CCGCGAGCTG CCGTCGGGTA ACCTGGTGCA CGAAGGGCCT GCCATACCGT TGGGCAAACA AGGCCATTTC GCCGGTAGTC ACATCCTGGT GCCACGGGCA GGCGTTGCGG TGCACATCAA CGCGTTCAAC TTCCCTATCT GGGGCATGCT GGAAAAGTTT GCCCCGACGT TCCTGGCCGG TATGCCCTGC ATCGTCAAGC CAGCGACCTC GACCAGCTAT TTGACCGAGG CCGTGGTACG CCTGATGAAT GCCTCCGGCC TGCTGCCCGA AGGCAGCCTG CAGCTTGTTA TCGGCAGCAC CGGCGACCTG CTCGACCGCC TGCAGGGGCA GGACGTGGTG ACCTTCACCG GGTCCGCCGA TACCGCTGCC AAATTGCGCG TGACGCCCAA CCTGATTCGC AACTCGGTGC CGTTCACTGC CGAGGCCGAC TCGCTCAACT GCGCCATCCT CGGCCCGGAC GTGAGTCCGG ACAGCGAAGA GTTCGACCTG TACATCAAGG AAGTGGTGCG TGAAATGACC ACTAAAGCCG GGCAGAAGTG TACCGCCATC CGCCGCGCGA TCGTCCCGGC CAGGCACCTG GATGCCGTTG CCACGCGCCT GCGCGAGCGC CTGAGCAAGG TCGTGGTTGG CGACCCGTCG CTTGAAGGTG TGCGCATGGG GGCCCTGGCC TCCCATGACC AGCAGCGCGA CGTTGGCGAG CGGGTGCGCA GCCTGCTGCA GAGTTGTGAT CAGCTGTTCG GCGCCAGCGA TGGCTTTGCC CCGCGTGGCG AAGGCGTGGC TGAAGGCGCG TTCTTTGCGC CAACCTTGTT GCAGGCCCGC GACCCACATG CCGAGGGCGG CGCCCACGAT ATCGAAGCGT TCGGCCCGGT CAGTACGCTG ATGGCCTATG ACGACCTCGA CGAAGCCTTG GCACTGGCTG CCCGTGGCAA AGGCAGCCTG GTGGCGACCC TGGTCACCGC CGACCGCAGC GTGGCCGCCA AGGCTATCCC GGTGGCGGCT GCCTGGCATG GCCGTCTGCT GGTGCTCGAT AGCCAGGCTG CCAAGGAGTC CACTGGGCAC GGCTCGCCGC TGCCGCAGCT CAAGCACGGT GGCCCGGGCC GCGCCGGTGG TGGTGAAGAG CTGGGTGGCC TGCGTGCGGT CAAGCATTAC CTGCAGCGCG CCGCCGTACA AGGCTCGCCG AGCATGCTCA CGGCGGTCAC CGGCGAGTAC GTGCGCGGCG GCGAAGTGAT CGAAACCGAC GTGCACCCGT TCCGTCGCTA CTTCGAGCAG CTGCGTATCG GCGAGTCGCT GCTCACCCAT CGCCGCACCG TGACAGAAGC TGACCTGGTC AATTTCGGCT GCCTGTCAGG CGACCATTTC TACATGCACT TCGACGAAAT CGCCGCCAAG GCGTCGCAAT TCGGTAAGCG CATTGCCCAC GGTTACTTCG TACTGTCGGC AGCGGCCGGG CTGTTTGTGT CGCCCGGTGC CGGACCGGTG CTGGCCAACT ATGGGCTGGA CACCCTGCGC TTCATCAACC CGGTGGGCAT TGGCGATACC ATCCAGGCGC GGCTGACCTG CAAGCGCAAG ATCGACCAGG GCAAGACCAG CCCGCTGGGG CAGCCGCAGG GGGTGGTGGC GTGGGATGTG GAGGTGACCA ATCAGCTGGG TGAGCTAGTG GCCAGCTATG ACATCCTGAC CTTGGTGCTG AAAAAGCCAG CATGA
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Protein sequence | MSAAPTLQSF IAGRWLGQHG AQALRSALDG HVLAYSHEER PDFAEAVDYA RARGLASLMG MDFQQRAQRL KALALYLADH KEQLYALSHH SGATRADSWI DIEGGNATLF SYAGIGSREL PSGNLVHEGP AIPLGKQGHF AGSHILVPRA GVAVHINAFN FPIWGMLEKF APTFLAGMPC IVKPATSTSY LTEAVVRLMN ASGLLPEGSL QLVIGSTGDL LDRLQGQDVV TFTGSADTAA KLRVTPNLIR NSVPFTAEAD SLNCAILGPD VSPDSEEFDL YIKEVVREMT TKAGQKCTAI RRAIVPARHL DAVATRLRER LSKVVVGDPS LEGVRMGALA SHDQQRDVGE RVRSLLQSCD QLFGASDGFA PRGEGVAEGA FFAPTLLQAR DPHAEGGAHD IEAFGPVSTL MAYDDLDEAL ALAARGKGSL VATLVTADRS VAAKAIPVAA AWHGRLLVLD SQAAKESTGH GSPLPQLKHG GPGRAGGGEE LGGLRAVKHY LQRAAVQGSP SMLTAVTGEY VRGGEVIETD VHPFRRYFEQ LRIGESLLTH RRTVTEADLV NFGCLSGDHF YMHFDEIAAK ASQFGKRIAH GYFVLSAAAG LFVSPGAGPV LANYGLDTLR FINPVGIGDT IQARLTCKRK IDQGKTSPLG QPQGVVAWDV EVTNQLGELV ASYDILTLVL KKPA
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