Gene Pput_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2488 
Symbol 
ID5191769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2836923 
End bp2838155 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content64% 
IMG OID640586941 
Productouter membrane porin 
Protein accessionYP_001267807 
Protein GI148547705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.246443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.663679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CACACTTCCT GTCAGCCGCC TGGCTGGCCA CCTTCGCCCT GCCGATGCCC 
GCGCTGGCCG ACTTCATCGG CGACAGCCAT GCACGCCTGG AGCTGCGCAA CCACTACATC
AACCGTGATT TTCGCCAGAG CAACGCCCCG CAGGCCAAGG CCGAGGAATG GGGCCAAGGC
TTTACCGCCA AGCTGGAGTC GGGCTTTACC GAGGGCCCGG TCGGCTTTGG CGTGGACGCG
CTGGGCCAGT TGGGCATCAA GCTCGACTCC AGCCGCGACC GCCGCAACAC CGGCCTGCTG
CCTTTTGGCC CGAACAGCCA CGAACCGGTC GATGACTACA GCGAGCTAGG CCTGACCGGC
AAGGTACGCG TGTCCAAGAG CACCTTGCGG CTGGGCACCT TGCAGCCGAT CCTGCCGGTG
GTGGTGTACA ACGACACCCG CCTGCTGGCG TCCACCTTCC AGGGTGGCCT GCTCACCAGT
CAGGACCTCG ATGGCCTCAC CTTCAATGCC GGACGCCTGA CCAAGGCCAA CCTGCGGGAT
TCGTCTGGCC GCGACGACAT CGGCTATGGC GCTGCCAGCA GTGACCACCT GGACTTTGGT
GGTGGCAGCT ACGCCATCAC CCCGCAAACC ACGGTCAGCT ATTACTACGC CAAGCTCCAG
GACATCTACC GTCAGCAGTT CGTCGGTCTG ATCGACACCC GCCCACTGGC AGAAGGACTG
AGCCTGCGCA GTGACCTGCG CTACTTCGAC AGCCGCAACG ACGGTGCCGA GCGTGCCGGC
AACATCGACA ACCGTAACTT CAACGCCATG TTCACCCTGG GCGTGCGGGC GCACAAGTTC
ACCGCCACCT GGCAGCAGAT GTCCGGTGAC AGCGCCTTCC CGTTCGTCAA CGGCGGCGAC
CCGTTCACCG TCAACCTGGT CACCTACAAC ACCTTCACCC GCGCCGGGCT GGACGCTTGG
CAAGTGCGCT ACGACTACGA CTTCGTTGCC ATGGGCATCC CCGGCCTGAG CTTCATGACC
CGCTACACCG ACGGTCGCCA CGCGGAAACT GCCACCGTGA CCAATGGCCG CGAGCGCGAG
CGCGACACCG ACATCACGTA TGTCATCCAG AGTGGCCCGT TCAAGGACGT CAGCCTGCGC
TGGCGCAATG TCACCTTCCG CTCCGGCAAC GGCCTGACCA ACGCCGTGGA CGAAAACCGC
CTGATCATCG GCTACACCCT GGCGCTGTGG TAA
 
Protein sequence
MNRTHFLSAA WLATFALPMP ALADFIGDSH ARLELRNHYI NRDFRQSNAP QAKAEEWGQG 
FTAKLESGFT EGPVGFGVDA LGQLGIKLDS SRDRRNTGLL PFGPNSHEPV DDYSELGLTG
KVRVSKSTLR LGTLQPILPV VVYNDTRLLA STFQGGLLTS QDLDGLTFNA GRLTKANLRD
SSGRDDIGYG AASSDHLDFG GGSYAITPQT TVSYYYAKLQ DIYRQQFVGL IDTRPLAEGL
SLRSDLRYFD SRNDGAERAG NIDNRNFNAM FTLGVRAHKF TATWQQMSGD SAFPFVNGGD
PFTVNLVTYN TFTRAGLDAW QVRYDYDFVA MGIPGLSFMT RYTDGRHAET ATVTNGRERE
RDTDITYVIQ SGPFKDVSLR WRNVTFRSGN GLTNAVDENR LIIGYTLALW