| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2487 |
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| Symbol | |
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| ID | 5195558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2835321 |
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| End bp | 2836883 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586940 |
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| Product | acetate permease |
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| Protein accession | YP_001267806 |
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| Protein GI | 148547704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.869989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.753083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA CCGCCATTTC GATGTTCATG GTGTTTGTCT GCTTCACCCT GCTGGTCACC
CGCTGGGCTG CGCTGCGCAC CCGCTCGGCC AGTGACTTCT ACACCGCCGG CGGCGGCTTG
ACTGGCATGC AGAACGGCTT GGCAATCGCT GGCGACATGA TCAGTGCCGC TTCGTTCCTG
GGCATTTCCG CGATGATGTT CATGAACGGC TACGACGGCC TGTTGTATGC CCTTGGCGTC
CTGGCGGGCT GGCCGATCAT CCTGTTCCTG ATTGCCGAGC GCCTGCGCAA CCTGGGCAAG
TACACCTTTG CCGACGTGGT CAGCTACCGG TTGGCGCAAA CCCCAGTGCG CTTGACCTCG
GCTTTCGGCA CCCTGGTGGT GGCGCTGATG TACCTGGTGG CCCAAATGGT CGGCGCTGGC
AAGCTGATCG AGCTGCTGTT CGGCATCAGC TACCTGTACG CCGTGATGCT GGTCGGTGTG
CTGATGGTTG CCTATGTCAC CTTCGGTGGC ATGCTCGCCA CCACCTGGGT GCAGATCATC
AAGGCGGTAA TGCTGCTATC AGGCACCAGT TTCATGGCCT TCATGGTGCT CAAGCACTTC
GGCTTCAGCA CCGAGGCCAT GTTTGCCAGT GCGGTGGCCG TGCATGCCAA GGGCCAGGCG
ATCATGGCCC CAGGCGGCTT GTTGTCCAAC CCGGTGGACG CCATTTCCCT CGGTTTGGGC
ATGATGTTCG GCACCGCTGG CCTGCCGCAT ATCCTGATGC GCTTCTTCAC TGTCAGTGAT
GCCAAGGAAG CACGCAAGAG CGTGTTCTAC GCCACCGGTT TCATTGGTTA CTTCTACCTG
CTGCTGATCG TTGTCGGCTT TGGCGCCATT GTCATGGTCG GCACTGAGCC GTCCTACCGC
GACGCCACTG GCGCCATCAT CGGTGGCGGC AACATGGTCG CCGTGCACCT GGCCCAGGCC
GTGGGTGGCA ACCTGTTCCT GGGCTTCATC TCTGCCGTCG CCTTCGCCAC CATTCTGGCT
GTGGTCGCCG GCCTGGCGCT GTCCGGGGCA TCGGCCGTGT CCCACGACCT GTATGCCTGC
GTGATGCGCA AAGGCAAGGC GACCGAGCAA GAGGAAATGC GCGTGTCACG CATTGCCACG
TTGCTCATCG GCCTGCTGGC GGTGATCCTG GGCCTGATGT TCGAGTCGCA GAACATTGCC
TTCCTTTCCG GCCTGGTGCT GGCGGTGGCC GCTTCGGTCA ACTTCCCGGT GCTGCTCCTT
TCCATGTTCT GGAAAGGCCT GACCACCCGC GGCGCGGTGT GCGGCAGCAT GGCCGGGCTG
GTCTCGGCGG TGCTGTTGGT AGTGCTGGGC CCGGCGGTGT GGGTCAACGT ACTGCACAAC
GAAACGGCGC TGTTCCCCTA CAGCAACCCT GCGCTGTTCT CCATGAGCCT GGCCTTCCTC
AGTGCCTGGG TGTTCTCGGT TACCGACACC TCCGAACGTG CCGTTGAAGA GCGTGGTCGC
TACCTGGGCC AGTTCATCCG CTCCATGACC GGTATCGGTG CGGCTGGCGC CAGCAAACAC
TGA
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| Protein sequence | MNWTAISMFM VFVCFTLLVT RWAALRTRSA SDFYTAGGGL TGMQNGLAIA GDMISAASFL
GISAMMFMNG YDGLLYALGV LAGWPIILFL IAERLRNLGK YTFADVVSYR LAQTPVRLTS
AFGTLVVALM YLVAQMVGAG KLIELLFGIS YLYAVMLVGV LMVAYVTFGG MLATTWVQII
KAVMLLSGTS FMAFMVLKHF GFSTEAMFAS AVAVHAKGQA IMAPGGLLSN PVDAISLGLG
MMFGTAGLPH ILMRFFTVSD AKEARKSVFY ATGFIGYFYL LLIVVGFGAI VMVGTEPSYR
DATGAIIGGG NMVAVHLAQA VGGNLFLGFI SAVAFATILA VVAGLALSGA SAVSHDLYAC
VMRKGKATEQ EEMRVSRIAT LLIGLLAVIL GLMFESQNIA FLSGLVLAVA ASVNFPVLLL
SMFWKGLTTR GAVCGSMAGL VSAVLLVVLG PAVWVNVLHN ETALFPYSNP ALFSMSLAFL
SAWVFSVTDT SERAVEERGR YLGQFIRSMT GIGAAGASKH
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