| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2485 |
|---|
| Symbol | |
|---|
| ID | 5190408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2833798 |
|---|
| End bp | 2834874 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640586938 |
|---|
| Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| Protein accession | YP_001267804 |
|---|
| Protein GI | 148547702 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.960936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT TTCACAGCCT GACCATCAAG CAAGTGCGCA ATGAGACCCG TGATGCGGTA
TCGATTGCCT TCGATGTGCC CGAGCACCTG CAGGACCAGT TCCGCTTCAC TCAGGGCCAG
TACCTGGTCA TGCGCACCCA GCTGGATAAC GAAGAAGTCC GCCGCTCCTA CTCCATCTGC
AGCGCCGTAC AGGACGGCGA ACTGCGCGTG GCCGTCAAGC GCGTGCCGGG CGGGCGCTTC
TCGGCGTTTG CCAATGAGGT GCTCAAGGAA GGCCAGCAGC TGGAAGTGAT GCCGCCATCG
GGCAGCTTCT TCGTGCCGCT GGACCCGGCT CGCCAGGGCA ACTATCTGGG TGTGGCCGCC
GGCAGCGGCA TCACCCCGAT ACTGTCGATC ATCGCCACTA CGCTGGCCAA CGAGCCGCAC
AGCCGTTTCA CCTTGCTGTA CGGCAACCGC TCCAGTTCGG GGGCGCTGTT CCGCGACAAG
CTCGAAGACC TGAAAAACCG TTACCTCGAC CGCTTGAACC TGATTTTCGT GTTCAGCCGC
GAACAGCAGG ATGTTGACCT GTACAACGGC CGCATCGACG CCGACAAATG CGGCCAGCTG
TTTTCGCGCT GGCTGGACGT TGCCGGGCTG GACGCGGCAT TCATCTGCGG CCCGCAGGCG
ATGACCGAGA CCGTGCGTGA CAGCCTGCAG GCCAACGGCA TGGCCAAGGA ACGCATTCAC
TTCGAGCTGT TCGCCGCCGC CGGCAGCGAG GCCCGCCGCG AAGCCCGTGA GGCGGCACGT
CAGGTGGATT CGGCGCTTAG CCATATCACC GTGATCAGCG ACGGCCGGGC ACTGAGCTTC
GACCTGCCGC GCAACACCCA GAACGTGCTG GACGCCGGCA ACGCCATTGG CGCCGAGCTG
CCCTACTCGT GCAAGGCCGG CGTGTGCTCC ACCTGCAAGT GCCGGGTGAT CGAGGGCGAA
GTGGAGATGG ACAGCAACCA TGCCCTCGAA GACTACGAAG TGGCGGCCGG GTATGTGCTG
TCGTGCCAGA CCTATCCGGT GAGCGACAAG GTGGTGCTGG ACTTCGACCA GTTGTAG
|
|---|
| Protein sequence | MSQFHSLTIK QVRNETRDAV SIAFDVPEHL QDQFRFTQGQ YLVMRTQLDN EEVRRSYSIC
SAVQDGELRV AVKRVPGGRF SAFANEVLKE GQQLEVMPPS GSFFVPLDPA RQGNYLGVAA
GSGITPILSI IATTLANEPH SRFTLLYGNR SSSGALFRDK LEDLKNRYLD RLNLIFVFSR
EQQDVDLYNG RIDADKCGQL FSRWLDVAGL DAAFICGPQA MTETVRDSLQ ANGMAKERIH
FELFAAAGSE ARREAREAAR QVDSALSHIT VISDGRALSF DLPRNTQNVL DAGNAIGAEL
PYSCKAGVCS TCKCRVIEGE VEMDSNHALE DYEVAAGYVL SCQTYPVSDK VVLDFDQL
|
|---|
| |