| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2467 |
|---|
| Symbol | |
|---|
| ID | 5194517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2816225 |
|---|
| End bp | 2817592 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640586920 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001267786 |
|---|
| Protein GI | 148547684 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.941259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.38784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGA CATTTCTTGG CGGCACCGGC ACCGTGACCG GCAGCAAATT CCTGTTGACC
CGTGACAGCA CGCGGGTATT GGTCGACTGC GGACTCTTCC AGGGTTTCAA GCAACTGCGC
CTGCGCAACT GGCAGCCACT GCCCCCGGCG CTGCGGGCGC TTGATGCGGT GGTGCTGACC
CACGCCCACC TTGACCACAG TGGTTATCTA CCGGTGCTGG TTCGGGAAGG CTACCGCGGG
CCGATCTACG CCACGCCGGC GACGTGCGCC TTGGCGGAAA TCCTCCTGCT CGACAGTGCA
CGGCTGCAGG AAGAGCAGGC CGAACATGCC AATCGCCACG GTTACTCCAA GCATGCGCCG
GCGCAACCGC TCTATACCGA GCAGGATGCC AAACGTGCCC TGGCACTGTT TCGGCCCGTG
GCGTTACATC AGGTGACCAT GATCGCCGAG GGCATGGAGT TACTGTTGCG TACCGCCGGA
CATATTCTGG GGGCAGCCAC GGTCCAGATC AGCGCCGAAG GGCAGACCGT GCTGTTTTCG
GGTGACCTCG GCCGCCCTCA GGATCCGATC ATGCGTGCGC CTGAGCTGGT CAGAACGGCG
GACGTGCTGT TGATCGAGTC TACCTATGGG GACCGCCAGC ATCCCGCCGA ATCGACCGAG
CAGTACCTGG CCAAGGTCAT CAACGAAACG CTCCTGCGCC ACGGCATTAC CCTGGTACCC
TCGTTCGCCG TCGGCCGTGC CCAACTGCTC ATGTATTACC TGTACACGCT CAAGCGCGAC
CGGTTGATCC CTGATGTCCC GGTCTACCTG AACAGCCCGA TGGCCACCGA CGCCACCGCC
TTGTACCAGC AGTACCGCAG TGAACATCGG CTGACCGCAG CCGAGTGCGC CGCCATGTGC
AGAGGCACGC ACATCGTCCG GACAGTCGAT GAGTCCAGGC ACCTGGACCA GCTGCGCGAG
CCCGCAGTGA TCATCGCCGC CAGTGGCATG GCGACCGGCG GACGGGTGCT TCACCACCTG
AAGGCGCTGG CCCCCAACCC ACGCAACAGC ATTCTCTTCT CGGGCTTTCA AGCCGGGGGG
ACGCGGGGTG CCGATATCGT CGCGGGCGCC CACAGTGTGC GGTTGCACGG CGAGGATGTG
CCCATCCGTG CACAGGTGCA TGCGATGGAG AATCTTTCTG CGCACGCCGA TGCCGATGAA
ATCATGGAAT GGTTGCGCGG GTTCACCCGG CCACCCCGTC AGACCTATGT CATTCATGGT
GAGCCACACG CTGCCGACAC CTTACGGCGG CGAATCAGCC TCGAACTCGG CTGGCAGGTG
TGCGTGCCTG AGTATCAGGA AACGGTTGCC ATCGACCCTG TGCGCTAG
|
|---|
| Protein sequence | MQLTFLGGTG TVTGSKFLLT RDSTRVLVDC GLFQGFKQLR LRNWQPLPPA LRALDAVVLT
HAHLDHSGYL PVLVREGYRG PIYATPATCA LAEILLLDSA RLQEEQAEHA NRHGYSKHAP
AQPLYTEQDA KRALALFRPV ALHQVTMIAE GMELLLRTAG HILGAATVQI SAEGQTVLFS
GDLGRPQDPI MRAPELVRTA DVLLIESTYG DRQHPAESTE QYLAKVINET LLRHGITLVP
SFAVGRAQLL MYYLYTLKRD RLIPDVPVYL NSPMATDATA LYQQYRSEHR LTAAECAAMC
RGTHIVRTVD ESRHLDQLRE PAVIIAASGM ATGGRVLHHL KALAPNPRNS ILFSGFQAGG
TRGADIVAGA HSVRLHGEDV PIRAQVHAME NLSAHADADE IMEWLRGFTR PPRQTYVIHG
EPHAADTLRR RISLELGWQV CVPEYQETVA IDPVR
|
|---|
| |