| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2453 |
|---|
| Symbol | |
|---|
| ID | 5191447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2800884 |
|---|
| End bp | 2801774 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640586906 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001267772 |
|---|
| Protein GI | 148547670 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.740896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACT ATCAACGGCT GTTGCTGATC ATGCGTCCAA TGCTGCACCA GGCGGTCGCC
CTGGAGCAGG CTGTTGCACT GGCCAGATCG GCATCGGCCA GCCTGCACAT CGTCGCCTTG
CTCGAGTCAT TGGACAAACT CTGGCTGCTG GAGTCCGGTA AGCATCAAGC GGAGCGGGAG
GCTTATCGGC TTGCTCAGCA TGAACAGCTG GAAGCCCAGG CAAACGCACT GCGTGCCTCC
GGCGTGCAGG TGACGACCGA GGTGGCCTGG AGTAACGACC TGCAGGATGA CATTCTGCAG
CACGTGCTGG AGATGCAACC GGACCTGCTG CTCAAGCAGG TCGAGCATGA GCCTGCGCTC
AAGCGCGCGT TCTTCACGCC GCTTGACTGG CAACTGTTGC GCCACTGCCC GGTCCCGGTC
TACTTGCTCG GTGCCAGCCA GCCGGCGTTG CCGCGCCAGA TCGTGGCGGC GGTGGACGTG
GCCGACACCT CGCCAGAGGG GCAAGCCCGA AATGACAGCA TCGTCCAGCA GGCCGGTGCT
TTGGCCTTGC AGACAGGGGC GCAACTGGAC CTGCTGCACG CCTGCGATCT GTCGATGGCC
TACATGGGCG ATATGGGGTA TGCCGCCTGG GCCATCGGTG ACATTGCCGA GCCCATGCGC
CAAGCGCTGG AGGATGATTT CAGGAAACTG GCCGAACGCT TCGGCGCACC ACCGCAACGT
TGCCATTTCG TGCTGGGGCG CCCGGTCGCG GTGCTCAGCG CATACGTCGA ATCACAGCCG
GTGGAGGTAC TGGTCCTGGG GCGGCCCATC GCACGGGGAC TGGACCGTCT GTTCGGCAGT
ACCACCGAAC ATGTGTTGTA CCAGGTACCT TGCAACGTCC TGGTGGTGTA G
|
|---|
| Protein sequence | MSHYQRLLLI MRPMLHQAVA LEQAVALARS ASASLHIVAL LESLDKLWLL ESGKHQAERE
AYRLAQHEQL EAQANALRAS GVQVTTEVAW SNDLQDDILQ HVLEMQPDLL LKQVEHEPAL
KRAFFTPLDW QLLRHCPVPV YLLGASQPAL PRQIVAAVDV ADTSPEGQAR NDSIVQQAGA
LALQTGAQLD LLHACDLSMA YMGDMGYAAW AIGDIAEPMR QALEDDFRKL AERFGAPPQR
CHFVLGRPVA VLSAYVESQP VEVLVLGRPI ARGLDRLFGS TTEHVLYQVP CNVLVV
|
|---|
| |