Gene Pput_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2442 
Symbol 
ID5192127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2790861 
End bp2791274 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID640586897 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001267763 
Protein GI148547661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0547672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.232418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCA TCTCCAACAA CGTGCATCTG TCGGATGCCG AAATCGAACT CACCTACATC 
CGCGCGCAAG GCGCGGGCGG GCAGAACGTC AACAAGGTGT CCAGCGCCGT GCACCTGCGC
TTCGACATCC CGTCTTCATC GTTGCCCGAG TTTTACAAGG CGCGGCTGCT GGCGCTGCAT
GACAGTCGAA TCACCGGCGC CGGCGTATTG ATCATCAAGG GCCAGCAGTA CCGCACACAG
GAGCAGAACC GTGCGGACGC TTTGGCGCGT CTTGCCGAGT TGATCATCAC CGCTGGCAAG
ACCGATAAGA AACGTCGCCC CACCAAGCCG ACCCTGGGCT CCAAGACCCG CCGCCTCGAA
GGAAAAGCCA GGCGCAGCGC TGTCAAGGCG GGTCGGGGGA GGGTGGAGTT CTAG
 
Protein sequence
MLTISNNVHL SDAEIELTYI RAQGAGGQNV NKVSSAVHLR FDIPSSSLPE FYKARLLALH 
DSRITGAGVL IIKGQQYRTQ EQNRADALAR LAELIITAGK TDKKRRPTKP TLGSKTRRLE
GKARRSAVKA GRGRVEF