Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2442 |
Symbol | |
ID | 5192127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2790861 |
End bp | 2791274 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586897 |
Product | peptidyl-tRNA hydrolase domain protein |
Protein accession | YP_001267763 |
Protein GI | 148547661 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0547672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.232418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCA TCTCCAACAA CGTGCATCTG TCGGATGCCG AAATCGAACT CACCTACATC CGCGCGCAAG GCGCGGGCGG GCAGAACGTC AACAAGGTGT CCAGCGCCGT GCACCTGCGC TTCGACATCC CGTCTTCATC GTTGCCCGAG TTTTACAAGG CGCGGCTGCT GGCGCTGCAT GACAGTCGAA TCACCGGCGC CGGCGTATTG ATCATCAAGG GCCAGCAGTA CCGCACACAG GAGCAGAACC GTGCGGACGC TTTGGCGCGT CTTGCCGAGT TGATCATCAC CGCTGGCAAG ACCGATAAGA AACGTCGCCC CACCAAGCCG ACCCTGGGCT CCAAGACCCG CCGCCTCGAA GGAAAAGCCA GGCGCAGCGC TGTCAAGGCG GGTCGGGGGA GGGTGGAGTT CTAG
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Protein sequence | MLTISNNVHL SDAEIELTYI RAQGAGGQNV NKVSSAVHLR FDIPSSSLPE FYKARLLALH DSRITGAGVL IIKGQQYRTQ EQNRADALAR LAELIITAGK TDKKRRPTKP TLGSKTRRLE GKARRSAVKA GRGRVEF
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