| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2436 |
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| Symbol | |
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| ID | 5191093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2785855 |
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| End bp | 2787642 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586892 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001267758 |
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| Protein GI | 148547656 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.262777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.635484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA CGGTAGGCGA CTTTTTGGTG GAGCGTCTGT ATCAATGGGG AGTGCGGCGC
ATCTTCGGTT ACCCCGGCGA TGGCATCAAT GGGATGTTTG GCGCGCTGGG TCGGGCCAAT
GGCAAGATTG AGTTCATCCA GGCCCGCCAT GAGGAAATGG CCGCTTTCAT GGCCAGCGCC
CATGCCAAGT TCACCGGCGA GCTTGGCGTT TGCATCGCCA CCTCTGGCCC AGGCGCCTCG
CACCTGCTTA CCGGCCTGTA CGATGCACGC ATGGACCATC AGCCGGTGCT GGCCATCGTC
GGCCAACAGG CCCGTGCCGC ACTGGGTGGG CACTACCAGC AGGAGCTGGA CCTGCTGTCG
ATGTTCAAAG ATGTAGCCGG CGCGTTCGTC CAGCAGGCCT CTACACCGGA GCAGGTGCGC
CACCTGCTAG ATCGCGCTGT TCGTACGGCC ATCGGCGAAC GCCGCGTCAC TGCCGTCATC
CTGCCGAACG ACCTGCAGGA CCTCCCCTAC AACGAGCCAC CGAGGGCTCA CGGTACCGTG
CATTCGGGCA TCGGCTACAG CAAGCCCAGG GTGTTGCCGT TCGACGAAGA CCTGCAGCGC
GCCGCCGATA TACTCAACAC CGGGCACAAG GTGGCGATAC TGGTGGGTGC CGGTGCGCTG
CAGGCGACAG AGCAGGTCAT TGCGATCGCC GAAAAGCTCG GCGCAGGGGT GGCCAAAGCA
TTGCTGGGCA AGGCTGTGCT GCCGGACGAT CTCCCTTGGG TCACCGGGTC TATCGGCCTG
CTCGGTACCG AACCCAGTTA TCAGCTGATG ACCCAATGCG ACACATTGCT GATGATCGGC
TCCGGCTTCC CCTATTCCGA GTTTTTGCCC AAGGAAGGCC AGGCGCGTGG TGTGCAGATC
GACCTGCAAC CAGACATGCT CAGCTTGCGC TACCCGATGG AGGTCAACCT GGTCGGCGAC
GCCAGCGAGA CACTGCGTGC CCTGTTGCCC TTGCTCGAGC ACAAGACCGA ACGGCGCTGG
CGCGAAAAGG TCGAGACCTG GCGCGCGCAG TGGGACAAGA CCGTGACCAA ACGCGCACTG
GTCAAGGCTG ACCCGATCAA TCCGCAACGC GTGGTCCATG AGCTGTCCCC TCGCCTGCCC
GACCGCGCCA TCATCACCAG CGATTCCGGC TCCTGTGCCA ACTGGTTTGC CCGCGACCTG
CAGATTCGCC AGGGTATGCA GTGCTCGCTG TCCGGTGGCC TGGCCTGCAT GGGCGCAGCC
GTGCCCTATG CGATTGCGGC CAAGTTCGCC CACCCGCAGA GCGCCGTGCT TGCCCTGGTG
GGCGATGGGG CGATGCAGAT GAACAACCTG GCCGAACTGA TCACCGTGGC CAAGTACTGG
CAACAATGGG AGAACCCGCA ATGGATCTGT GCAGTGTTCA ATAATGAAGA CCTCAACCAG
GTGACCTGGG AGCAACGGGT CATGGAGGGC GACCCCAAGT TCGACGCTTC GCAGTCGATT
CCTGACGTGC CCTATCATTT GTTCGCCATT TCCATTGGCC TGCAAGGTAT CTATGTCGAT
CGCGAAGAGG ACGTTGCCGC CGGGTGGGAG CGCGCGCTAG CTGCTGATCG GCCAGTACTG
ATCGAGTTCA AGACCGACCC GAACGTGCCG CCCCTGCCAC CCCACATCAA CCTGGGCCAA
GCGAAGAAGT TTGCCAGTAC CTTGCTCAAG GGTGATCCCG ACCAGGCGGG CATTATCGTG
CAGACAGCCA AGCAGGTGCT CGGCTCGGTG CTGCCGGGCA AGAAATGA
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| Protein sequence | MTGTVGDFLV ERLYQWGVRR IFGYPGDGIN GMFGALGRAN GKIEFIQARH EEMAAFMASA
HAKFTGELGV CIATSGPGAS HLLTGLYDAR MDHQPVLAIV GQQARAALGG HYQQELDLLS
MFKDVAGAFV QQASTPEQVR HLLDRAVRTA IGERRVTAVI LPNDLQDLPY NEPPRAHGTV
HSGIGYSKPR VLPFDEDLQR AADILNTGHK VAILVGAGAL QATEQVIAIA EKLGAGVAKA
LLGKAVLPDD LPWVTGSIGL LGTEPSYQLM TQCDTLLMIG SGFPYSEFLP KEGQARGVQI
DLQPDMLSLR YPMEVNLVGD ASETLRALLP LLEHKTERRW REKVETWRAQ WDKTVTKRAL
VKADPINPQR VVHELSPRLP DRAIITSDSG SCANWFARDL QIRQGMQCSL SGGLACMGAA
VPYAIAAKFA HPQSAVLALV GDGAMQMNNL AELITVAKYW QQWENPQWIC AVFNNEDLNQ
VTWEQRVMEG DPKFDASQSI PDVPYHLFAI SIGLQGIYVD REEDVAAGWE RALAADRPVL
IEFKTDPNVP PLPPHINLGQ AKKFASTLLK GDPDQAGIIV QTAKQVLGSV LPGKK
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