Gene Pput_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2433 
Symbol 
ID5194576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2782036 
End bp2784234 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content64% 
IMG OID640586889 
Productaldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 
Protein accessionYP_001267755 
Protein GI148547653 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.266842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.459587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CCACACCGGT ATCCGGCACG TCCCTGGACC GCGTAGACGG CGTGGCGAAG 
GTCACCGGGC ACGCGCGTTA CGCGGGCGAA TACCCCGAGG TGGACCTGCT CCATGGCAGC
GTTGTGTCCA GTACCATCGC CCGAGGTCGG GTACTCAACA TCGACAGTGC GCAGGCGATG
CGCGTGCCCG GGGTCGTCGC CGTGCTCGAC CATGACCAAC GTCCGCATAT TTCCAGTTAT
GACGACGACT ACAGCGACGC CGATTCCGCG AAGGGGGCGC CGTTTCGGCC CTTGTTCAAT
GATCGAGTGC TCTACAACGG GCAACCGCTG GCGCTGGTGG TCGCCCAGAC CCTCGAGCTG
GCCCGGTATG CAGGTTCGCT GATCAGGATC GAGTACGCCG AGGAGCCCCA CCAGACAGAC
CTGGGCGCAT GCCAGCAGTC GCATGCGGCA CCCGCCGAAA CACCGGCGCC GCGTGGCGAC
TTTGCCGCGC AGTTTGCCGG GGCCCCGGTG CAGGTGGATG CCACCTACCT GACAGCCAAC
GAGTACCACA ACCCGATGGA GCCCCATGCG TCAACCGTAC TCTACAAAGG CGACGGCACG
CTGGAAATCC ACGACAAGAC CCAAGGCACG CAAAACTGCC AGGACTACCT GCACAAGGTG
TTTGGCCTGC CCAAGGCAAA CATCCGCGTG CGCGCGGCAT TCGTCGGCGG TGCCTTCGGC
TCGGGCTTGC GCCCGCAGTA CCAGTTGCCA CTGGCAGTGA TGGCGGCGTT GCACCTGCAG
CGCTCGGTGC GCGTCACGCT GACTCGCCAG CAGATGTTCA CCTTTGGCTA CCGGCCCCGC
ACCGAGCAGC GCCTGCGCCT GGGTGCTGAC GCAAACGGGC AGTTGCTGGC GATCGCCCAC
GATGCGCTTG GCCAGACCTC CCGCTTCGAG GATTTCACCG AGCACGTGGT GGAATGGAGT
GGCATGCTCT ACCAGTGCGA CAACGTTGCC CTCAGCTATC GCCTGGCCTC GCTCGATGTG
TACACCCCGC TGGACATGCG TGCGCCTGGC GCCGCGTCGG GGATGATTGC CCTGGAATGC
GCCATGGATG AGCTTGCCTG TGCAGCGCAG ATTGACCCGC TTGACCTGCG CCGGCGCAAT
TTTGCCGCCA GCAATGCCAA CGAGGGTAAG CCCTACTCCA GCAAGGAACT GCTGGCGTGC
TACCGGCAAG GTGCCGAACG TTTTGGCTGG CAGAACCGTA ATCCGCAACC GCGCAGCATG
CACCATGGCA ACCAGCTGGT CGGCTGGGGG ATGGCCGGCG GCGTCTGGGA AGCCATGCAG
ATGAAGGCCA GCGCCAAAGC GCGCTTCGAT GCCCAAGGCC ACCTCACCGT CTGCAGTGCC
ACCACCGATA TCGGGACCGG CACCTATACC GTCATGACGC AGATCGCAGC CGACGCGGCT
GGCGCCAGGG TGCAGGATGT CACCTTCGTG CTGGGTGACT CTTCACTGCC CACCGCACCG
CTTCAGGGCG GATCGTTCAC GGTGTCGTCG GTCGGCTCGG CCGTGCGCCA GGCCTGCCAG
GTACTGCGCA CCAAAGTGCT GGAACATGCG CGCAAGATGT ACCCCCAAGT GGCCAGCACG
GCCCGGGAGC AGATCATTTT CGCCGACGGC TACCTGCACG CGGGCAGCCA TCGCCTGGCC
TTGGCGGACA TCATCGCCAG CGCCCCCGAA GGTGAGTTCG AAGTGCAGAT CGACGCCGAG
CCCGGCGCCA GACGCCAACC GTTCTCCACC GCCACGCATT CGGCGGTATT CGTGGAAGTC
CACGTCGACG AGGACCTTGG CACAATCAAG GTAGTACGGG TAGTCAGCGC CGTTGCGGCG
GGACGGGTAA TCAACCCGAA AACCGCGCGC AGTCAGATTT TGGGAGGCGT GGTGTGGGGG
GTGGGTATGG CCCTCCACGA AGCCGCGTTG ACCGATCATC GGTTGGGCCG CATCGTCAAC
CACAACCTGG CGGAGTACCA CATCCCGGTC AACGCAGACA GCGGGGATAT CGAGGTGATC
TTCGTTGAAG AGCACGACGA TATCGTCAAC GAGCTGGGGT CCAAGGGTGT GGGCGAAATC
GGCGTCGTTG GGGTGGCAGC CGCCGTGGCC AATGCGGTCT ACCATGCCAC GGGCAAGCGT
GTGAGGGAGT TTCCGATCAC GCTCGACAAG GTGCTGTGA
 
Protein sequence
MIKPTPVSGT SLDRVDGVAK VTGHARYAGE YPEVDLLHGS VVSSTIARGR VLNIDSAQAM 
RVPGVVAVLD HDQRPHISSY DDDYSDADSA KGAPFRPLFN DRVLYNGQPL ALVVAQTLEL
ARYAGSLIRI EYAEEPHQTD LGACQQSHAA PAETPAPRGD FAAQFAGAPV QVDATYLTAN
EYHNPMEPHA STVLYKGDGT LEIHDKTQGT QNCQDYLHKV FGLPKANIRV RAAFVGGAFG
SGLRPQYQLP LAVMAALHLQ RSVRVTLTRQ QMFTFGYRPR TEQRLRLGAD ANGQLLAIAH
DALGQTSRFE DFTEHVVEWS GMLYQCDNVA LSYRLASLDV YTPLDMRAPG AASGMIALEC
AMDELACAAQ IDPLDLRRRN FAASNANEGK PYSSKELLAC YRQGAERFGW QNRNPQPRSM
HHGNQLVGWG MAGGVWEAMQ MKASAKARFD AQGHLTVCSA TTDIGTGTYT VMTQIAADAA
GARVQDVTFV LGDSSLPTAP LQGGSFTVSS VGSAVRQACQ VLRTKVLEHA RKMYPQVAST
AREQIIFADG YLHAGSHRLA LADIIASAPE GEFEVQIDAE PGARRQPFST ATHSAVFVEV
HVDEDLGTIK VVRVVSAVAA GRVINPKTAR SQILGGVVWG VGMALHEAAL TDHRLGRIVN
HNLAEYHIPV NADSGDIEVI FVEEHDDIVN ELGSKGVGEI GVVGVAAAVA NAVYHATGKR
VREFPITLDK VL