| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2429 |
|---|
| Symbol | |
|---|
| ID | 5193842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2778809 |
|---|
| End bp | 2780011 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640586885 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001267751 |
|---|
| Protein GI | 148547649 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0410446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.763827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAT TGACCTACCA CGGCGCAAAC GATGTCAGGG TCGATACCGT CCCAGACCCC
ATCATTCAAG ATCCGGACGA TATCATCCTT CGGGTAACCG CAACCGCCAT TTGCGGCTCG
GATCTACACC TTTATCGGGG CAAGATCCCG CAGACCGAGG CGGGTGATAT TTTTGGCCAT
GAGTTCATGG GGGTCGTCGA GGATACCGGC AGGGCCGTTA CCAACCTGCA GATCGGCGAC
CGCGTGGTGG TTCCTTTCGT CATTGCCTGC GGCAGTTGCT TTTTCTGCCA ACACGACCTG
TTCGCCGCCT GCGAAACCAC CAACACCGGT CGCGGGTCAC TCATCAACAA AAAAGGCATC
CCGCCCGGAG CCGCACTCTT CGGATATAGC CATCTGTATG GAGGCATCCC CGGAGGACAA
GCTGACTACG TTCGAGTGCC GAAAGCCAAT GTTGGCCCGT TCAAGGTGCC AACCGCGCTG
GCTGATGACA AGGTGCTGTT TCTCTCCGAT ATCCTGCCAA CCGCCTGGCA GGCAGTCCTC
AACGCCGAGA TCGGCCAGGG CTCTTCATTA GCCATTTATG GCGCGGGGCC GGTGGGTCTG
CTGACTGCCG CCTGCGCGCG AATGCTCGGT GCCCAGACCA TCTTCATGGT CGATGACAAC
GACTACCGTC TGACCTATGC CCAGGACGCT TACGGTGTCA CCGCGATCAA CTTCGAGCAG
GATGACGACC CTGCCGACAG CATCATCCGC CAGACACCAG GCATGCGCGG TGTCGACGCG
GTCATCGATG CCGTTGGCTT CGAGGCCAAG GGCAGCACCG CCGAAACAGT CATGACGGCA
TTGAAGATCG AAGGCAGCAG TGGCAAGGCC TTGCGCCAGA GCATTTCAGC TGTGCGCCGC
GGAGGCATTG TCAGTGTCCC CGGCGTGTAT GCCGGCTTCA TCCACGCCTT CATGTTCGGC
GACGCATTCG ACAAAGGCCT CACGTTCAAG ATGGGCCAGA CACATGTGCA GAAATACCTG
CCAGAGCTGC TTGAGCACAT CGAGGCCGGT CGTCTGCAAC CCGAGCGCAT CGTCACCCAC
CGCCTCGCCC TGGAGGAAGC GACCATGGGC TACAGGATGT TCGACCAGAA ACAGGACAAC
TGCCGCAAGG TCATTCTGGT TCCCGGCGCG GCATCCGGCA CCTTGGGCCC CGAATACGTG
TAA
|
|---|
| Protein sequence | MRALTYHGAN DVRVDTVPDP IIQDPDDIIL RVTATAICGS DLHLYRGKIP QTEAGDIFGH
EFMGVVEDTG RAVTNLQIGD RVVVPFVIAC GSCFFCQHDL FAACETTNTG RGSLINKKGI
PPGAALFGYS HLYGGIPGGQ ADYVRVPKAN VGPFKVPTAL ADDKVLFLSD ILPTAWQAVL
NAEIGQGSSL AIYGAGPVGL LTAACARMLG AQTIFMVDDN DYRLTYAQDA YGVTAINFEQ
DDDPADSIIR QTPGMRGVDA VIDAVGFEAK GSTAETVMTA LKIEGSSGKA LRQSISAVRR
GGIVSVPGVY AGFIHAFMFG DAFDKGLTFK MGQTHVQKYL PELLEHIEAG RLQPERIVTH
RLALEEATMG YRMFDQKQDN CRKVILVPGA ASGTLGPEYV
|
|---|
| |