| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2424 |
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| Symbol | |
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| ID | 5195260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2773734 |
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| End bp | 2774837 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586880 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001267746 |
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| Protein GI | 148547644 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.295502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.460452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC GTCCTGCCGC CTTAGTCGGT TGCTTACTGC CACTCGCCCT CGTAGCTTGC
GGGGACTCTT CACCTGGAAA GGACCCGAGA GATAAACCGC CAGTCGTGAA AGCGGTCTCA
GTGCAGGACG CGTCAGAACT TGCACGTTCG TTTTCCGGGG TTGTGGTAGC TCGCACGCAG
AGTGACCTCG GCTTCCGAGT ATCCGGAAAA ATCTTGCAGC GCCTGGTCGA TACCGGACAA
ACAGTCAAAC GCGCTCAGCC CTTGATGCGC CTGGATCCGG TGGATCTGAA TCTGCAGGCG
CGCGCGCAGC AAGAGGCAGT AACTGCTGCT CGGGCACGGG CCAAGCAGAC CAGTGACGAC
GAAGCTCGCT ATCGAGGGCT GGTGGCCGAG GGCGCGGTCT CGGCATCGTC TTACGACCAG
ATCAAAGCTG CGGCTGATGC CGCCAAGGCG CAACTCAGTG CCGCGCAAGC TCAGGCTGAC
GTTGCCAGGA ACGCCACTGA ATATGCGGTC TTGCTAGCCG ACGCCGACGG TGTAGTGATG
GACACGCTGG CCGAACCGGG CCAGGTCGTC AGTGCTGGCC AAGCAGTTGT AAAACTGGCC
AGGGCTGGGC AACGTGAAGC TGTCGTCTAC TTGCCAGAAA CGCTTCGACC GGCGCCTGGC
TCGACTGCAC TCGCCACGCT ATTTGGCAAG CCTGCACAGG CCGTACCTGC TCATCTGCGC
TTACTTTCAG ATGCTGCAGA CCCGATTACG CGCACATTCG AGGCCAGGTA CGTGCTCACT
GGGCCTTTGG CGAGCGCGCC ATTAGGTGCA ACCATTACGC TTGATATTCC AAATACTGAT
ACGCATTTTG ACGCAAAGCA GATACCCATC GGCGCACTCT TTGACCCGGG TAACGGAGCC
GGGGTCTGGG TGATAGCTGG CCAGCCGGCC AAGGTGTCGT GGCGCGCGGT AGAAGTGCTG
AGTGTCAGTG ACGAAAAAGC TGTCGTGAAG AGTGATCTGA ACGCTGGCGA TCGGATCGTG
GCACTGGGTG CGCATCTGCT GCGCGATGGT GTTGAGGTCA TGGAACAGGC TCAAACAGCT
CAGGTCACGG AGCACCAGCC ATGA
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| Protein sequence | MRLRPAALVG CLLPLALVAC GDSSPGKDPR DKPPVVKAVS VQDASELARS FSGVVVARTQ
SDLGFRVSGK ILQRLVDTGQ TVKRAQPLMR LDPVDLNLQA RAQQEAVTAA RARAKQTSDD
EARYRGLVAE GAVSASSYDQ IKAAADAAKA QLSAAQAQAD VARNATEYAV LLADADGVVM
DTLAEPGQVV SAGQAVVKLA RAGQREAVVY LPETLRPAPG STALATLFGK PAQAVPAHLR
LLSDAADPIT RTFEARYVLT GPLASAPLGA TITLDIPNTD THFDAKQIPI GALFDPGNGA
GVWVIAGQPA KVSWRAVEVL SVSDEKAVVK SDLNAGDRIV ALGAHLLRDG VEVMEQAQTA
QVTEHQP
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