Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2423 |
Symbol | |
ID | 5195259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2770645 |
End bp | 2773737 |
Gene Length | 3093 bp |
Protein Length | 1030 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640586879 |
Product | acriflavin resistance protein |
Protein accession | YP_001267745 |
Protein GI | 148547643 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC TTCGTTTCAA CCTGTCCGCG CTCGCAGTAC GCGAGCGATC AATCACCCTC TTCCTGATTG TGCTGATCGC CTTCGCCGGA ACGCTGGCCT TCTTCAAATT GGGCCGTGCA GAAGATCCGC CCTTCACCGT CAAGCAGATG ACGATTATCA CTGCCTGGCC CGGCGCCACT GCACAAGAGA TGCAAGATCT GGTGGCCGAA CCGTTGGAAA AACGCATGCA GGAGCTGCGT TGGTATGACC GTACCGAAAC CTACTCCCGG CCCGGGTTGG CATTCACGAT GGTTTCGCTG CAAGACAAGA CCCCGCCTTC GGCGGTTCAG GAGGAGTTCT ACCAGGCCCG CAAGAAAGCG GGTGATCAGG CCAAGCTCAT GCCAGCGGGC GTGATTGGCC CAATGCTCAA TGATGAATTC TCGGACGTGA CATTTGCGGT CTACGCGCTC AAAGCCAAAG GCGAACCGCA GCGCCAGCTG GTACGCGACG CCGAAACACT GCGCCAGCAG CTGCTGCACG TGCCGGGCGT CAAGAAGGTC AACATCATCG GGGAACAGGC TGAACGGATA TTCGTGTCCT TTTCTCATGA CCGCCTGGCC ACACTCGGCA TCACGCCACA GGACATTTTC TCGGCCCTGG ACAACCAGAA TGCCCTGTCA CCGGCGGGTT CGGTGGAAAC GCAAGGGCCA CACGTGGTGG TCAGGGTTGA CGGCGCCTTC GATCAACTGA CAAAGATTCG CGAAACCCCT GTGGTCGCCC AGGGCCGCGC CCTGAAACTG TCGGATGTGG CCGACGTTGA ACGCGGCTAT GAAGATCCCG CGACGTTCCT GGTACGCAAC GATGGCGAAC CAGCCTTGCT GCTTGGCATT GTCATGCGCG AAGGCTGGAA CGGCCTCGAC CTAGGCAAGG CCCTGGAGGC CGAAACAGCC AAAATCAACG AAAGCATGCC TTTGGGCATG ACGCTCAGCA AGGTCACCGA TCAGGCAGTA AACATTACGT CCTCCGTCGA CGAGTTCATG ATCAAGTTTT TTGTTGCCCT GCTGGTCGTG ATGCTCGTCT GCTTCCTCAG CATGGGCTGG CGTGTCGGCG TTGTCGTCGC AGCCGCGGTG CCACTGACAC TGGCGATCGT ATTTGTGGTG ATGGCCGCAA CAGGCAAGAA TTTCGACCGG ATTACGCTGG GTTCGCTCAT CCTGGCCTTA GGGTTGCTGG TCGACGACGC GATCATCGCC ATCGAAATGA TGGTCGTTAA GATGGAAGAA GGTTACGACC GCATCAAAGC TTCGGCATAT GCCTGGAGTC ACACGGCAGC CCCCATGCTG TCCGGCACAC TGGTTACCGC CATCGGATTC ATGCCTAACG GTTTCGCCCA GTCCACTGCC GGCGAATACA CGAGCAACAT GTTCTGGATT GTCGGCATCG CCCTGATCGC ATCCTGGGTG GTAGCGGTAG CATTCACCCC CTACCTGGGC GTGAAGTTGT TGCCTAGGAT CAAGACGATT GAAGGTGGTC ATGCCGCTAT TTACAACACC CGTCATTACA ACCGATTCCG CACTTTGTTG GGCTGGGTGA TCGCACATAA ATGGCTAGTG GCAAGCACCG TCGTTTCGAC ATTTGTGGCC GCCGTGCTTG GCATGGGACT GGTAAAGAAA CAGTTCTTCC CGACCTCCGA CCGCCCCGAA GTGCTTGTGG AGCTGCAGAT GCCTTACGGC ACCTCCATCG AACAGACAAA CGCCACTGCG ATCAGGGTTG AGTCCTGGTT ACGTCAGCAA GAGGAGGCGA AGATAGTCAC CACTTACATC GGCCAAGGCC CACCCCGCTT TTTCCTGGCA ATGGCCCCTG AGTTGCCCGA CCCGTCCTTT GCCAAGATTG TGGTCCTGAC CGAAAACCAG GGCGCTCGTG AGGCCCTCAA GCATCGTCTT CGGGAGGCGG CCTCCGAAGG TCTGGCACCC GGCGCTCAAG TGCGGGTAAC ACAACTGGTA TTCGGGCCCT ACTCCCCCTA CCCGGTCGCC TATCGGGTGA TGGGCCCGGA TGCCTCGCAA CTGCGCCAGA TTGCAGCACG CGTCCAAAGC GTGCTGCAGG CGAGCTCCAT GATGAAGACC GTCAATACCG ACTGGGGTCC GCTTGTTCCC ACGCTTCACT TCTCCCTGAA TCAAGATCGC CTGCAAGCGG TTGGCCTGAC GTCCGCCTCG GTGTCGCAGC AGCTTCAATT CCTGCTGACC GGTGTGCCAA TCACGTCGGT CAGGGAAGAT ATCCGCTCTG TGCAGGTTGT AGGGCGTGCC GCTGGCCAGA TCAGACTCGA TCCTGCCCAG ATCGAGAGTT TCACCCTGGT AGGCTCGAAC GGTCAGCGCG TTCCTGTTTC GCAGATCGGT GATGTGAGTA TTCGTATGGA GGATCCCATC CTCCGCCGCC GCGACCGAAC GCCCACCATG ACAGTGCGGG GTGACATCGC CGAAGGGCTG CAGCCGCCTG ATGTATCCAC GGCGATCTGG AAAGACCTCC AGCCCATCGT CAGGCAGCTG CCTGCGGGCT ACAAAATCGA AATGGCAGGC TCTATCGAGG AGTCGGCCAA GGCCAGCCAG GCTATCGTCC CTCTCCTGCC GATCATGATT GCCCTGACGT TGTTGATCAT CATACTGCAG GTGCGCTCTA TCTCGGCGAT GGTCATGGTG TTTCTGACTT CACCGCTGGG GTTGATCGGC GTAGTACCCG TATTGCTGCT GTTCGGCCAA CCGTTCGGCA TCAACGCGTT AGTCGGCTTG ATCGCGCTCT CCGGGATTCT GATGCGCAAC ACCCTCATCC TGATCGGGCA GATTGACCAC AACCAGCTTG AAGGACTTGC CCCCTTCGAC GCTGTGGTCG AGGCCACAGT GCAACGCGCA CGCCCGGTCT TGCTTACGGC ATTGGCAGCC ATCCTGGCCT TCATCCCCCT CACCCACTCG GTGTTCTGGG GCACCTTGGC CTACACCCTG ATCGGAGGCA CGTTCGTGGG CACGATCATG ACCTTGGTGT TCCTGCCGGC GATGTATTCC ATCTGGTTCA AGATCCACCC AGATAGCCGC ATTGCCAAGC CAGCAGCTGC ACGCCGCGCC TGA
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Protein sequence | MSQLRFNLSA LAVRERSITL FLIVLIAFAG TLAFFKLGRA EDPPFTVKQM TIITAWPGAT AQEMQDLVAE PLEKRMQELR WYDRTETYSR PGLAFTMVSL QDKTPPSAVQ EEFYQARKKA GDQAKLMPAG VIGPMLNDEF SDVTFAVYAL KAKGEPQRQL VRDAETLRQQ LLHVPGVKKV NIIGEQAERI FVSFSHDRLA TLGITPQDIF SALDNQNALS PAGSVETQGP HVVVRVDGAF DQLTKIRETP VVAQGRALKL SDVADVERGY EDPATFLVRN DGEPALLLGI VMREGWNGLD LGKALEAETA KINESMPLGM TLSKVTDQAV NITSSVDEFM IKFFVALLVV MLVCFLSMGW RVGVVVAAAV PLTLAIVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE GYDRIKASAY AWSHTAAPML SGTLVTAIGF MPNGFAQSTA GEYTSNMFWI VGIALIASWV VAVAFTPYLG VKLLPRIKTI EGGHAAIYNT RHYNRFRTLL GWVIAHKWLV ASTVVSTFVA AVLGMGLVKK QFFPTSDRPE VLVELQMPYG TSIEQTNATA IRVESWLRQQ EEAKIVTTYI GQGPPRFFLA MAPELPDPSF AKIVVLTENQ GAREALKHRL REAASEGLAP GAQVRVTQLV FGPYSPYPVA YRVMGPDASQ LRQIAARVQS VLQASSMMKT VNTDWGPLVP TLHFSLNQDR LQAVGLTSAS VSQQLQFLLT GVPITSVRED IRSVQVVGRA AGQIRLDPAQ IESFTLVGSN GQRVPVSQIG DVSIRMEDPI LRRRDRTPTM TVRGDIAEGL QPPDVSTAIW KDLQPIVRQL PAGYKIEMAG SIEESAKASQ AIVPLLPIMI ALTLLIIILQ VRSISAMVMV FLTSPLGLIG VVPVLLLFGQ PFGINALVGL IALSGILMRN TLILIGQIDH NQLEGLAPFD AVVEATVQRA RPVLLTALAA ILAFIPLTHS VFWGTLAYTL IGGTFVGTIM TLVFLPAMYS IWFKIHPDSR IAKPAAARRA
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