Gene Pput_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2423 
Symbol 
ID5195259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2770645 
End bp2773737 
Gene Length3093 bp 
Protein Length1030 aa 
Translation table11 
GC content59% 
IMG OID640586879 
Productacriflavin resistance protein 
Protein accessionYP_001267745 
Protein GI148547643 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC TTCGTTTCAA CCTGTCCGCG CTCGCAGTAC GCGAGCGATC AATCACCCTC 
TTCCTGATTG TGCTGATCGC CTTCGCCGGA ACGCTGGCCT TCTTCAAATT GGGCCGTGCA
GAAGATCCGC CCTTCACCGT CAAGCAGATG ACGATTATCA CTGCCTGGCC CGGCGCCACT
GCACAAGAGA TGCAAGATCT GGTGGCCGAA CCGTTGGAAA AACGCATGCA GGAGCTGCGT
TGGTATGACC GTACCGAAAC CTACTCCCGG CCCGGGTTGG CATTCACGAT GGTTTCGCTG
CAAGACAAGA CCCCGCCTTC GGCGGTTCAG GAGGAGTTCT ACCAGGCCCG CAAGAAAGCG
GGTGATCAGG CCAAGCTCAT GCCAGCGGGC GTGATTGGCC CAATGCTCAA TGATGAATTC
TCGGACGTGA CATTTGCGGT CTACGCGCTC AAAGCCAAAG GCGAACCGCA GCGCCAGCTG
GTACGCGACG CCGAAACACT GCGCCAGCAG CTGCTGCACG TGCCGGGCGT CAAGAAGGTC
AACATCATCG GGGAACAGGC TGAACGGATA TTCGTGTCCT TTTCTCATGA CCGCCTGGCC
ACACTCGGCA TCACGCCACA GGACATTTTC TCGGCCCTGG ACAACCAGAA TGCCCTGTCA
CCGGCGGGTT CGGTGGAAAC GCAAGGGCCA CACGTGGTGG TCAGGGTTGA CGGCGCCTTC
GATCAACTGA CAAAGATTCG CGAAACCCCT GTGGTCGCCC AGGGCCGCGC CCTGAAACTG
TCGGATGTGG CCGACGTTGA ACGCGGCTAT GAAGATCCCG CGACGTTCCT GGTACGCAAC
GATGGCGAAC CAGCCTTGCT GCTTGGCATT GTCATGCGCG AAGGCTGGAA CGGCCTCGAC
CTAGGCAAGG CCCTGGAGGC CGAAACAGCC AAAATCAACG AAAGCATGCC TTTGGGCATG
ACGCTCAGCA AGGTCACCGA TCAGGCAGTA AACATTACGT CCTCCGTCGA CGAGTTCATG
ATCAAGTTTT TTGTTGCCCT GCTGGTCGTG ATGCTCGTCT GCTTCCTCAG CATGGGCTGG
CGTGTCGGCG TTGTCGTCGC AGCCGCGGTG CCACTGACAC TGGCGATCGT ATTTGTGGTG
ATGGCCGCAA CAGGCAAGAA TTTCGACCGG ATTACGCTGG GTTCGCTCAT CCTGGCCTTA
GGGTTGCTGG TCGACGACGC GATCATCGCC ATCGAAATGA TGGTCGTTAA GATGGAAGAA
GGTTACGACC GCATCAAAGC TTCGGCATAT GCCTGGAGTC ACACGGCAGC CCCCATGCTG
TCCGGCACAC TGGTTACCGC CATCGGATTC ATGCCTAACG GTTTCGCCCA GTCCACTGCC
GGCGAATACA CGAGCAACAT GTTCTGGATT GTCGGCATCG CCCTGATCGC ATCCTGGGTG
GTAGCGGTAG CATTCACCCC CTACCTGGGC GTGAAGTTGT TGCCTAGGAT CAAGACGATT
GAAGGTGGTC ATGCCGCTAT TTACAACACC CGTCATTACA ACCGATTCCG CACTTTGTTG
GGCTGGGTGA TCGCACATAA ATGGCTAGTG GCAAGCACCG TCGTTTCGAC ATTTGTGGCC
GCCGTGCTTG GCATGGGACT GGTAAAGAAA CAGTTCTTCC CGACCTCCGA CCGCCCCGAA
GTGCTTGTGG AGCTGCAGAT GCCTTACGGC ACCTCCATCG AACAGACAAA CGCCACTGCG
ATCAGGGTTG AGTCCTGGTT ACGTCAGCAA GAGGAGGCGA AGATAGTCAC CACTTACATC
GGCCAAGGCC CACCCCGCTT TTTCCTGGCA ATGGCCCCTG AGTTGCCCGA CCCGTCCTTT
GCCAAGATTG TGGTCCTGAC CGAAAACCAG GGCGCTCGTG AGGCCCTCAA GCATCGTCTT
CGGGAGGCGG CCTCCGAAGG TCTGGCACCC GGCGCTCAAG TGCGGGTAAC ACAACTGGTA
TTCGGGCCCT ACTCCCCCTA CCCGGTCGCC TATCGGGTGA TGGGCCCGGA TGCCTCGCAA
CTGCGCCAGA TTGCAGCACG CGTCCAAAGC GTGCTGCAGG CGAGCTCCAT GATGAAGACC
GTCAATACCG ACTGGGGTCC GCTTGTTCCC ACGCTTCACT TCTCCCTGAA TCAAGATCGC
CTGCAAGCGG TTGGCCTGAC GTCCGCCTCG GTGTCGCAGC AGCTTCAATT CCTGCTGACC
GGTGTGCCAA TCACGTCGGT CAGGGAAGAT ATCCGCTCTG TGCAGGTTGT AGGGCGTGCC
GCTGGCCAGA TCAGACTCGA TCCTGCCCAG ATCGAGAGTT TCACCCTGGT AGGCTCGAAC
GGTCAGCGCG TTCCTGTTTC GCAGATCGGT GATGTGAGTA TTCGTATGGA GGATCCCATC
CTCCGCCGCC GCGACCGAAC GCCCACCATG ACAGTGCGGG GTGACATCGC CGAAGGGCTG
CAGCCGCCTG ATGTATCCAC GGCGATCTGG AAAGACCTCC AGCCCATCGT CAGGCAGCTG
CCTGCGGGCT ACAAAATCGA AATGGCAGGC TCTATCGAGG AGTCGGCCAA GGCCAGCCAG
GCTATCGTCC CTCTCCTGCC GATCATGATT GCCCTGACGT TGTTGATCAT CATACTGCAG
GTGCGCTCTA TCTCGGCGAT GGTCATGGTG TTTCTGACTT CACCGCTGGG GTTGATCGGC
GTAGTACCCG TATTGCTGCT GTTCGGCCAA CCGTTCGGCA TCAACGCGTT AGTCGGCTTG
ATCGCGCTCT CCGGGATTCT GATGCGCAAC ACCCTCATCC TGATCGGGCA GATTGACCAC
AACCAGCTTG AAGGACTTGC CCCCTTCGAC GCTGTGGTCG AGGCCACAGT GCAACGCGCA
CGCCCGGTCT TGCTTACGGC ATTGGCAGCC ATCCTGGCCT TCATCCCCCT CACCCACTCG
GTGTTCTGGG GCACCTTGGC CTACACCCTG ATCGGAGGCA CGTTCGTGGG CACGATCATG
ACCTTGGTGT TCCTGCCGGC GATGTATTCC ATCTGGTTCA AGATCCACCC AGATAGCCGC
ATTGCCAAGC CAGCAGCTGC ACGCCGCGCC TGA
 
Protein sequence
MSQLRFNLSA LAVRERSITL FLIVLIAFAG TLAFFKLGRA EDPPFTVKQM TIITAWPGAT 
AQEMQDLVAE PLEKRMQELR WYDRTETYSR PGLAFTMVSL QDKTPPSAVQ EEFYQARKKA
GDQAKLMPAG VIGPMLNDEF SDVTFAVYAL KAKGEPQRQL VRDAETLRQQ LLHVPGVKKV
NIIGEQAERI FVSFSHDRLA TLGITPQDIF SALDNQNALS PAGSVETQGP HVVVRVDGAF
DQLTKIRETP VVAQGRALKL SDVADVERGY EDPATFLVRN DGEPALLLGI VMREGWNGLD
LGKALEAETA KINESMPLGM TLSKVTDQAV NITSSVDEFM IKFFVALLVV MLVCFLSMGW
RVGVVVAAAV PLTLAIVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE
GYDRIKASAY AWSHTAAPML SGTLVTAIGF MPNGFAQSTA GEYTSNMFWI VGIALIASWV
VAVAFTPYLG VKLLPRIKTI EGGHAAIYNT RHYNRFRTLL GWVIAHKWLV ASTVVSTFVA
AVLGMGLVKK QFFPTSDRPE VLVELQMPYG TSIEQTNATA IRVESWLRQQ EEAKIVTTYI
GQGPPRFFLA MAPELPDPSF AKIVVLTENQ GAREALKHRL REAASEGLAP GAQVRVTQLV
FGPYSPYPVA YRVMGPDASQ LRQIAARVQS VLQASSMMKT VNTDWGPLVP TLHFSLNQDR
LQAVGLTSAS VSQQLQFLLT GVPITSVRED IRSVQVVGRA AGQIRLDPAQ IESFTLVGSN
GQRVPVSQIG DVSIRMEDPI LRRRDRTPTM TVRGDIAEGL QPPDVSTAIW KDLQPIVRQL
PAGYKIEMAG SIEESAKASQ AIVPLLPIMI ALTLLIIILQ VRSISAMVMV FLTSPLGLIG
VVPVLLLFGQ PFGINALVGL IALSGILMRN TLILIGQIDH NQLEGLAPFD AVVEATVQRA
RPVLLTALAA ILAFIPLTHS VFWGTLAYTL IGGTFVGTIM TLVFLPAMYS IWFKIHPDSR
IAKPAAARRA