Gene Pput_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2405 
Symbol 
ID5194513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2747630 
End bp2748655 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID640586862 
Producthypothetical protein 
Protein accessionYP_001267728 
Protein GI148547626 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCC GGGCAGCCGG CTGCGCAGCA CTCGCCACCG GCCTGCTCGC CGCCGCCTAT 
GCCGTGTGGC CGCAAGCCCC GGCGCCGGCG CTGCTGTGCA CGGACTACAG CGGCCTGCCC
GCGCAGCGCC AAGGCCCTTG GCGAGACGGC ATGGTGCACG TGCCGGGCGG CGAGTTCAGC
TTTGGTTCAA GCCGCTTTTA CGACGAAGAA GGCCCGCCTC ACCCCGCCAA GGTGTCCGGC
TTCTGGATTG ACGTGCATCC GGTCACCAAC GCCCAGTTCG CGCGCTTCGT CAAGGCCACC
GGGTATGTCA CCCATGCCGA GCGCGGTACC CGTGTCGAGG ACGACCCTGC CCTGCCCGGC
GCGCTGCGGG TACCGGGTGC GATGGTGTTT CATCAGGGTG CGGACGTGCT CAGCCCCGGC
TGGCAGTTCG TGCCCGGCGC CAACTGGCGA CACCCGCAAG GGCCGGGCAG CAGCCTGGCC
GGGCTGGACA ATCATCCGGT GGTGCAGATC GCCCTGGAAG ATGCCCAGGC CTATGCCCGC
TGGGCAGGCC GCGAACTGCC CAGCGAGGCG CAGCTGGAAT ACGCCATGCG CGGCGGCCTG
ACCGATGCCG ACTTCAGCTG GGGTGCCACC GAGCAGCCCA AGGGCAAGCT CATGGCCAAT
ACCTGGCAGG GCCAGTTCCC TTATCGCAAT GCGGCGAAGG ATGGTTTTAC GGGTACATCA
CCCGTGGGCT GCTTCCCGGC CAACGGCCTT GGCCTGTTCG ATGCCGGCGG CAATGTCTGG
GAGCTGACTC GCACGGGCTA TCGGCCAGGC CATGACGCAC AGCGCGACGC CAAGCTCGAC
CCCTCAGGCC CGACCCTGAG TGACAGCTTC GACCCGGCAG ACCCCGGCGT GCCGGTGGCG
GTGATCAAAG GCGGCTCGCA CCTGTGTTCG GCGGACCGCT GCATGCGCTA CCGCCCCTCG
GCACGCCAGC CGCAGCCGGT GTTCATGACG ACCTCGCACG TGGGTTTCAG AACGATTCGG
CAATGA
 
Protein sequence
MIARAAGCAA LATGLLAAAY AVWPQAPAPA LLCTDYSGLP AQRQGPWRDG MVHVPGGEFS 
FGSSRFYDEE GPPHPAKVSG FWIDVHPVTN AQFARFVKAT GYVTHAERGT RVEDDPALPG
ALRVPGAMVF HQGADVLSPG WQFVPGANWR HPQGPGSSLA GLDNHPVVQI ALEDAQAYAR
WAGRELPSEA QLEYAMRGGL TDADFSWGAT EQPKGKLMAN TWQGQFPYRN AAKDGFTGTS
PVGCFPANGL GLFDAGGNVW ELTRTGYRPG HDAQRDAKLD PSGPTLSDSF DPADPGVPVA
VIKGGSHLCS ADRCMRYRPS ARQPQPVFMT TSHVGFRTIR Q