Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2400 |
Symbol | |
ID | 5194634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2740323 |
End bp | 2741153 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586857 |
Product | p-hydroxycinnamoyl CoA hydratase/lyase |
Protein accession | YP_001267723 |
Protein GI | 148547621 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAT ACGAAGGCCG CTGGACCACC GTGAAGGTCG AACTGGAAGC GGGCATCGCC TGGGTGACCC TCAATCGCCC GGAAAAACGC AATGCCATGA GCCCCACCCT GAACCGGGAA ATGGTCGACG TGCTGGAAAC CCTCGAGCAG GACGCTGACG CTGGCGTGCT GGTATTGACC GGTGCCGGCG AGTCCTGGAC CGCCGGCATG GACCTGAAGG AGTACTTCCG CGAGGTGGAC GCCGGCCCGG AAATCCTCCA GGAAAAGATT CGTCGCGAAG CCTCGCAATG GCAATGGAAG TTGCTGCGTC TGTATGCCAA ACCGACCATC GCCATGGTCA ACGGCTGGTG CTTCGGCGGC GGCTTCAGCC CACTGGTGGC ATGCGACCTG GCGATCTGCG CCAACGAAGC GACCTTCGGC CTGTCGGAAA TCAACTGGGG CATCCCGCCT GGCAATCTGG TCAGCAAGGC CATGGCCGAT ACCGTTGGCC ATCGTCAGTC GCTGTACTAC ATCATGACCG GCAAGACCTT CGATGGTCGC AAGGCTGCCG AGATGGGCCT GGTGAACGAC AGTGTGCCGC TGGCCGAGCT GCGTGAAACC ACCCGCGAGT TGGCGCTGAA CCTGCTGGAA AAGAACCCGG TGGTGCTGCG CGCCGCGAAG AATGGCTTCA AGCGCTGCCG CGAGCTGACC TGGGAACAGA ACGAGGACTA CCTCTACGCC AAGCTCGACC AGTCGCGCCT GCTGGACACT ACCGGCGGCC GCGAGCAGGG CATGAAGCAG TTCCTCGACG ACAAGAGCAT CAAGCCGGGC CTGCAGGCCT ACAAGCGCTG A
|
Protein sequence | MSKYEGRWTT VKVELEAGIA WVTLNRPEKR NAMSPTLNRE MVDVLETLEQ DADAGVLVLT GAGESWTAGM DLKEYFREVD AGPEILQEKI RREASQWQWK LLRLYAKPTI AMVNGWCFGG GFSPLVACDL AICANEATFG LSEINWGIPP GNLVSKAMAD TVGHRQSLYY IMTGKTFDGR KAAEMGLVND SVPLAELRET TRELALNLLE KNPVVLRAAK NGFKRCRELT WEQNEDYLYA KLDQSRLLDT TGGREQGMKQ FLDDKSIKPG LQAYKR
|
| |