Gene Pput_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2400 
Symbol 
ID5194634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2740323 
End bp2741153 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID640586857 
Productp-hydroxycinnamoyl CoA hydratase/lyase 
Protein accessionYP_001267723 
Protein GI148547621 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT ACGAAGGCCG CTGGACCACC GTGAAGGTCG AACTGGAAGC GGGCATCGCC 
TGGGTGACCC TCAATCGCCC GGAAAAACGC AATGCCATGA GCCCCACCCT GAACCGGGAA
ATGGTCGACG TGCTGGAAAC CCTCGAGCAG GACGCTGACG CTGGCGTGCT GGTATTGACC
GGTGCCGGCG AGTCCTGGAC CGCCGGCATG GACCTGAAGG AGTACTTCCG CGAGGTGGAC
GCCGGCCCGG AAATCCTCCA GGAAAAGATT CGTCGCGAAG CCTCGCAATG GCAATGGAAG
TTGCTGCGTC TGTATGCCAA ACCGACCATC GCCATGGTCA ACGGCTGGTG CTTCGGCGGC
GGCTTCAGCC CACTGGTGGC ATGCGACCTG GCGATCTGCG CCAACGAAGC GACCTTCGGC
CTGTCGGAAA TCAACTGGGG CATCCCGCCT GGCAATCTGG TCAGCAAGGC CATGGCCGAT
ACCGTTGGCC ATCGTCAGTC GCTGTACTAC ATCATGACCG GCAAGACCTT CGATGGTCGC
AAGGCTGCCG AGATGGGCCT GGTGAACGAC AGTGTGCCGC TGGCCGAGCT GCGTGAAACC
ACCCGCGAGT TGGCGCTGAA CCTGCTGGAA AAGAACCCGG TGGTGCTGCG CGCCGCGAAG
AATGGCTTCA AGCGCTGCCG CGAGCTGACC TGGGAACAGA ACGAGGACTA CCTCTACGCC
AAGCTCGACC AGTCGCGCCT GCTGGACACT ACCGGCGGCC GCGAGCAGGG CATGAAGCAG
TTCCTCGACG ACAAGAGCAT CAAGCCGGGC CTGCAGGCCT ACAAGCGCTG A
 
Protein sequence
MSKYEGRWTT VKVELEAGIA WVTLNRPEKR NAMSPTLNRE MVDVLETLEQ DADAGVLVLT 
GAGESWTAGM DLKEYFREVD AGPEILQEKI RREASQWQWK LLRLYAKPTI AMVNGWCFGG
GFSPLVACDL AICANEATFG LSEINWGIPP GNLVSKAMAD TVGHRQSLYY IMTGKTFDGR
KAAEMGLVND SVPLAELRET TRELALNLLE KNPVVLRAAK NGFKRCRELT WEQNEDYLYA
KLDQSRLLDT TGGREQGMKQ FLDDKSIKPG LQAYKR