| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2398 |
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| Symbol | |
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| ID | 5192585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2738432 |
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| End bp | 2739556 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586855 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001267721 |
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| Protein GI | 148547619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC GCATCATCGC GTTTTTCACC GAAACCACCG TATTCGGCAT CTCCATTCTC
AATCTGTTGG TGGCGCTGAC AGTCGCCACC TTAGTCTTCC TGGTCGCCCG TGCCGCCATC
AGTTTCCTGA TGCGCCGGGT ACGGCGCTGG TCAGAACACG AAGGCCCATT GAGCCAGATA
ATGGCCAAGG TGCTTTCCGG CACCAGCAAC GTTCTGTTGT TGCTGGCCTC TTTGCTGGTG
GGCCTGAGCA TGCTCGACTT GCCCGAGCGC TGGCTGAGCA GAGTCAGCAG CCTGTGGTTC
GTGGTCGCTG CCTTGCAGAT TGGCCTGTGG GCCAACCGCG CCATCGGCCT GGGCCTGAGC
CGCTACTTCG CCCGCCACCG TACCGACGGC CTGAACCAGG GCAGCGCACT GGCAACCCTT
TCGGCCTGGG GCGCGCGGGT CCTGTTGTGG TCAGTCGTAG TGCTGGCGAT GCTGTCGAAC
CTGGGGGTGA ACATCACCGC CTTCGTCGCC AGCCTTGGCG TGGGTGGCAT CGCGGTGGCG
CTGGCTGTGC AGAATATCCT TGGCGACCTG TTCGCTTCGT TGTCGATCGC CGTGGACAAG
CCGTTCGAGA TCGGTGACTT CATCGTCATC GGGCCCCTGG CGGGCACCGT TGAGCACGTT
GGCCTCAAAA CCACACGCAT CCGCAGCCTC GGCGGCGAAC AGATCGTCAT GGCCAACGCC
AGCATGATCA GCAGCACCAT CCAGAATTAC AAGCGCCTGC AAGAGCGTCG CATCGTGTTC
GAGTTCGGGC TTTCCTACGA CACGCCCACC GAGGCCGTGA AGAAAGCGCC AGCCATCGTA
GAAGACGCCA TCAAGGCCCA GGAGCAGGCG CGTTTCGATC GCGCTCACCT GCGCGGCTTC
GGCAAAGAGG CGCTGGAGTT CGAGTGTGTC TACATTGTCC GGGACCCAGG CTACAACCTT
TACATGGACA TTCAGCAAGC GATCAACTTC AGGCTGCTGG AGCGGTTCTC GCAAATCGGC
GCCAAGTTCG CCGTGCCGGT GCGCGCGATC AAGGTCACGG CATTGCCAGA GGCCACCGGC
CTGCATGGCC AGGCTCGCGA AGGCCTGAGC ATCAGGGGCG CTTGA
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| Protein sequence | MNDRIIAFFT ETTVFGISIL NLLVALTVAT LVFLVARAAI SFLMRRVRRW SEHEGPLSQI
MAKVLSGTSN VLLLLASLLV GLSMLDLPER WLSRVSSLWF VVAALQIGLW ANRAIGLGLS
RYFARHRTDG LNQGSALATL SAWGARVLLW SVVVLAMLSN LGVNITAFVA SLGVGGIAVA
LAVQNILGDL FASLSIAVDK PFEIGDFIVI GPLAGTVEHV GLKTTRIRSL GGEQIVMANA
SMISSTIQNY KRLQERRIVF EFGLSYDTPT EAVKKAPAIV EDAIKAQEQA RFDRAHLRGF
GKEALEFECV YIVRDPGYNL YMDIQQAINF RLLERFSQIG AKFAVPVRAI KVTALPEATG
LHGQAREGLS IRGA
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