| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2394 |
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| Symbol | |
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| ID | 5195274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2731294 |
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| End bp | 2733837 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586851 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_001267717 |
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| Protein GI | 148547615 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.25898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACA ACCCCCACGT TAACCTGACC AACTGCGACC GGGAGCCCAT CCAGATTCCC
GGGAGCATCC AGCCCCATGG CTGCCTGCTG GCCTGTGATG CCTCGGCGAC CGTGGTGCTG
CGCCATTCGG TCAACGCCCC ACAGATGCTG GGTGTAGCAA ACGATATCAA TGGTCAGAAA
CTGCACGCGG TGCTGGGTGA CGAGGTCACG CATACGCTTC GCAACGCACT TGCCCGTACC
CGAGATGCCT CGCGGCCCGC GCTCAGTTTC GGCGTGACGC TGCCCAACGG CGAGGCCGTC
GACATCGCCG CCCACTTGTA CAAAGGCACG GCAATCCTCG AATTCGAGCC CGCCGGGGCG
AGCATCGCCG AACCGATCGA GCTGGCCCGC ACACTGATTG CCCAACTGCG CGAAATCGAC
CAGACCCACA AGCTGTTCCG CGACGCCGCC CGCTTTGTCA GGGCGGTGCT CGGTTACGAC
CGGGTGATGA TCTACCAGCT GGGAGCCGAC GGTGCCGGCA AGGTGGTTGC CGAGTCCAAG
CGTAGCGACC TCGAAAGCTT CATGGGCCAA TACTTCCCCG CCTCCGATAT CCCCCAGCAG
GCCCGCGCGC TCTACCTGCG CAACCCGATC CGGGTAATCT CCGACGCCCA GTTCAATACG
GTCGCCATCA ACCCGGTGCT CGACCCCTCG GGCGAACCGC TCGACCTGTC CTACGCGCAC
CTGCGCAGCG TCTCGCCGAT CCATTGCGAA TACCTGTGCA ACATGGGCGT GGGCGCCTCG
ATGTCGATTT CCGTCATCGT CAATGGCGAG CTGTGGGGAA TGATTGCCTG CCATCACTAC
GCACCGCGCA CGCTGGCCAT GGGGCAACGT GTGGCCGCCG AGATGTTCGG TGAGTTCTTC
TCCCTGCATA TCGAGACCCT GCGTAGCCGG CAAAAACTCG AAGCTGCCGT GCGCATCCAC
AAAGCCCTGG ACAGCCTGCT GCGCGACGCC AACCAGGCGG CGGACATTGA TGGGTTCTTC
CACGCACGCC TGCCCCGGTT GATGTCGCTG ATTCCCTGCG ACGGCATCGG CATGTCGCTG
CTAGGCCGCT GGTCGTGCGC AGGGCTCGCG CCGCCCCAAA CGGCCGTGCC TGATCTGCTG
CGCCTGGCAG ACATGGTCAG CGAAGGCCGA ATCTGGGCGT CCAATCGCCT GTCGACGGTG
CTTCCGTCGG CCCAGGCGTA TTTTAATGAT GTGTCGGGTG TGCTGATCGT CCCGATGTCG
CAACACCCAA GGGATTACTT GATCTTCTTC CGCAAGGAGG TGGTCGAGAC ACTCGATTGG
GCCGGGGACC CGAACAAGAC CTATAACAGC GGCGCGTTGG GCGACCGCCT GACGCCCCGC
AAGAGCTTCG CCATCTGGAA AGAAACCGTT CACCAGCAGT CGCTACCCTG GACCGAGCAG
GACCGCCAGT TTGGCGATGC CATCCGTACC GCTATCGTCG AAGTGGTACT GCACAACAGC
GAACTGCTCG CCAGTGAACG CGCCAAAGCC GACGTGCGCC AGCGCATGCT CAACGAAGAG
CTCAACCACA GGGTCAAGAA CATCCTGTCG CTGATTGGTG CACTGGTTGC CCATCCGACC
CCGGAGAGCC AGACCCTGCA GGACTATGTG GCAACGCTCA AAGGGCGTAT CCAGGCCTTG
TCGTTGGCCC ATGACCAGGT GGTGCGCGGT GACGGTGGCG GGCGCCTGGC GAAGCTGCTG
GAGGCCGAGC TTTCTCCCTA TCGCACGGCT GCCGACGTGA TCGAGTTGCA GGGCCCGAAC
GTCATCCTCG ATGCGCGCGC GTACTCGGTC ATGGCGCTGG TGCTGCATGA ACTGGCCACC
AACGCGGCCA AGTATGGTGC GCTATCGCGG GCTGGCGGCA AGCTTTCGGT GAGCTGGGCA
ATCGACGCCA GCAACGCCTG TGCCATCAGT TGGCGGGAAA TGGGTGGGCC AACGGTACGC
CCGCCCAGCC GCAGCGGCTT CGGCACGGTG CTGATCGACC GCAGCATCCC ATTCGACCTG
GGTGGCACCA GCGCAGTGGA ATATCACCCC GAAGGCCTGC AAGGCTTTTT CAGAATCCCG
GCCAAGCACC TTTCCGTAGC CGAAACGGCA GAAACCGCTC TCCCGGCCAC GCCTCTGGCC
CGTGCAAACG GTGCGCTTGC AGCGCGCTCG GGCTTGTGTG TGCTGATACT CGAGGATCAA
CTGGTGATTG CAGTAGGCCT GGAGCAAATT CTCAACGATG CGCAAATCGA GGACGTGATC
ACCGCCAGCT CCGAGGACCA AGCCATGCAA CTGCTTGGTA GCCACAAACC GGACGCGGCA
ATACTGGATG TCAATCTGGG CACCGGAACA TCCATTTCCG TAGCAGATGA ACTGGTTCGC
CGGCAGGTCC CGTTCCTCTT TGCCACCGGC TATGGCGACG GCCTCAGCAT TCCCGAGCAC
TTGCAGCATG TGCCCATCAC CCGCAAGCCT TATGACGCCA ATGCCATTCT GGCCAGCCTG
CAAGGTCTGC TTGAGCTGGG GTGA
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| Protein sequence | MTYNPHVNLT NCDREPIQIP GSIQPHGCLL ACDASATVVL RHSVNAPQML GVANDINGQK
LHAVLGDEVT HTLRNALART RDASRPALSF GVTLPNGEAV DIAAHLYKGT AILEFEPAGA
SIAEPIELAR TLIAQLREID QTHKLFRDAA RFVRAVLGYD RVMIYQLGAD GAGKVVAESK
RSDLESFMGQ YFPASDIPQQ ARALYLRNPI RVISDAQFNT VAINPVLDPS GEPLDLSYAH
LRSVSPIHCE YLCNMGVGAS MSISVIVNGE LWGMIACHHY APRTLAMGQR VAAEMFGEFF
SLHIETLRSR QKLEAAVRIH KALDSLLRDA NQAADIDGFF HARLPRLMSL IPCDGIGMSL
LGRWSCAGLA PPQTAVPDLL RLADMVSEGR IWASNRLSTV LPSAQAYFND VSGVLIVPMS
QHPRDYLIFF RKEVVETLDW AGDPNKTYNS GALGDRLTPR KSFAIWKETV HQQSLPWTEQ
DRQFGDAIRT AIVEVVLHNS ELLASERAKA DVRQRMLNEE LNHRVKNILS LIGALVAHPT
PESQTLQDYV ATLKGRIQAL SLAHDQVVRG DGGGRLAKLL EAELSPYRTA ADVIELQGPN
VILDARAYSV MALVLHELAT NAAKYGALSR AGGKLSVSWA IDASNACAIS WREMGGPTVR
PPSRSGFGTV LIDRSIPFDL GGTSAVEYHP EGLQGFFRIP AKHLSVAETA ETALPATPLA
RANGALAARS GLCVLILEDQ LVIAVGLEQI LNDAQIEDVI TASSEDQAMQ LLGSHKPDAA
ILDVNLGTGT SISVADELVR RQVPFLFATG YGDGLSIPEH LQHVPITRKP YDANAILASL
QGLLELG
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