| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2392 |
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| Symbol | |
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| ID | 5192790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2728457 |
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| End bp | 2729338 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586849 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267715 |
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| Protein GI | 148547613 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.888596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA AGGCATTGCG CTGCTGTGTC GAAATCGTCC GGCAGGGCAG CTTCACCAAG
GCCGCGCAGC ACCTGCACAT CGCCCAGCCC GCGCTGAGCA TGGCCGTCAC CCGGCTGGAA
GAAGAGCTGG GGGTAACCCT GTTCAACCGC ACCACGCGCA AAGTGATCCT CACGGCAGAA
GGCGAGCAGT TCTTGCCGCG CATTGCCTCT GCCCTGCGCG AAATGGACGT TGCCCGGCAA
GAACTGCGCG ACATGGCCGA CCTCAAACGC GGCGAAGTGC GCCTGGGTAT CCCGCCGATG
TTCGGCCTGC ACTACGTCCC CGGGTTGATG AACGCCTTCC GCAAGTCGTA CCCGGGCATT
GCCATGACCG TGTTCGAAGG CAGTGCCGAA GACATTGGCC ATCGCCTGGA GCAACGGGAA
ATCGACCTGG CGCTGCTGGA GTCCCGGCGT GTACCGCCCG ACAAGGAGTC GATCCTGCTG
GGCAGCGACG AGATGCTGGC GTGCATGCAC CCGGATCACC CCTATGCCGG TAAGGCCTAC
CTCACCGCCG AAGACCTGCG CAATACCGAC ATGGTGGTGT TCGATCGCAC CTTCGTTCAA
CGCCATCTTC TGGATGCGTT CTTCGCCGAA CATGGCATCA CTTACCAGGT GGCGCTACAG
AGCAACTTCG TCTCGCTGGT GGTGCAGGCC GCGCTGGACA ACATGGGGGT GGCGACCCTG
CTGCGCTCGG TGCAGCAACG CACGCCAGGC ATCGTCGGCG TGCCGTTCCG GCCAGCACAG
CAGATGAGTT TCCGCTTGTG CTGGCGCTCG GGGGAATACC TGTCGCTGGC CAGCAAGCGG
TTTATCGACT TTGCTGCACA GACGCATTAC CTGGAGCGGT GA
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| Protein sequence | MNLKALRCCV EIVRQGSFTK AAQHLHIAQP ALSMAVTRLE EELGVTLFNR TTRKVILTAE
GEQFLPRIAS ALREMDVARQ ELRDMADLKR GEVRLGIPPM FGLHYVPGLM NAFRKSYPGI
AMTVFEGSAE DIGHRLEQRE IDLALLESRR VPPDKESILL GSDEMLACMH PDHPYAGKAY
LTAEDLRNTD MVVFDRTFVQ RHLLDAFFAE HGITYQVALQ SNFVSLVVQA ALDNMGVATL
LRSVQQRTPG IVGVPFRPAQ QMSFRLCWRS GEYLSLASKR FIDFAAQTHY LER
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