Gene Pput_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2383 
Symbol 
ID5190735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2718348 
End bp2719313 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID640586840 
Productdeoxyribonuclease I 
Protein accessionYP_001267706 
Protein GI148547604 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.178356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC TGCTTTACGC CGTAACCTTA TTATTTTCCT TTACCCTCCC TGCCTTGGCC 
AACCCGCCGA CCACCTTCAC CGAAGCCAAG GTGGTGGCCA AGCAGAAGGT CTACCTGGAC
CAGGCCAGCA GTGCCATGGG CGACCTGTAC TGCGGTTGCA AATGGACCTG GGTGGGCAAG
TCTGGCGGGC GCATCGATGC CGCCTCGTGT GGTTACCAGA CGCGCAAGCA GCAGAACCGT
GCCGAACGCA CCGAGTGGGA ACACATCGTG CCCGCCCACA CCTTCGGCAA CCAGCGCCAG
TGCTGGAAGA ACGGCGGCCG TGAGCACTGC GTGGACAACG ACCCGGTGTT CCGCGCCATG
GAGGCCGACC TGTTCAACCT TTACCCGGCC GTGGGTGAGG TCAACGGTGA CCGCAGCAAC
TTCAACTACG GCATGGTCAC TGGCAATGCC GGCGAATACG GCCAATGCAC CACCAAGGTC
GATTTCGTCC AGCGCACCGC CGAACCGCGT GACGAAGTCA AAGGCCTGGT GGCCCGCACC
ACGTTCTACA TGTTCGACCG CTACAAGCTG AACATGTCGC GCCAACAGCA ACAGCTGCTG
ATGGCCTGGG ACAAGCAACA CCCGGTGTCG GCCTGGGAGA AAGAACGCGA CCGGCGCATT
GCCGCGATCA TGGGCCATGC CAACCCGTTC GTAAGCGGCG AACGCAAATG GACCGCCGGC
TACAAGCCGG TTGGCAGCGG CGTGGTAGAG GCGGTGCCGG TAAAAGCGGC CAAGCCAGAG
GCCAAACCAA GCCTGGCCAG CGCCGGTTCG GTTGGCGCCG TGCTTGGCAA CCGCAACAGC
CACGTCTATC ACCTGTCAGT CGGCTGCCCG GGCTACAACC AGGTTACAGC GAAGAACCAG
GTTACCTTCG CAAACGAAGG TGAAGCGCAG GCAGCGGGGT ATCGCAAGGC AGGCAACTGC
CGCTGA
 
Protein sequence
MKSLLYAVTL LFSFTLPALA NPPTTFTEAK VVAKQKVYLD QASSAMGDLY CGCKWTWVGK 
SGGRIDAASC GYQTRKQQNR AERTEWEHIV PAHTFGNQRQ CWKNGGREHC VDNDPVFRAM
EADLFNLYPA VGEVNGDRSN FNYGMVTGNA GEYGQCTTKV DFVQRTAEPR DEVKGLVART
TFYMFDRYKL NMSRQQQQLL MAWDKQHPVS AWEKERDRRI AAIMGHANPF VSGERKWTAG
YKPVGSGVVE AVPVKAAKPE AKPSLASAGS VGAVLGNRNS HVYHLSVGCP GYNQVTAKNQ
VTFANEGEAQ AAGYRKAGNC R