Gene Pput_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2382 
Symbol 
ID5190734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2717343 
End bp2718305 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID640586839 
Productgluconate 2-dehydrogenase 
Protein accessionYP_001267705 
Protein GI148547603 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.54026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC GAATCGTCCT GTATAAACGC CTGTCAGACG ACTTGATGGC ACGCCTGCAA 
GATCGCGTCG AGGTGACCTG GGTGGACACC ACCCAGCCCG ATGGCCTGGC CCGCCTGCGC
GATGCGTTAC CGGGGGCGCA CGGGTTGCTG GGGGCCAGCC TGCGCCTGGA TGCCAGCCTG
CTCGACCTTG CCCCGCAACT CGAAGTGGTG TCGAGCGTTT CGGTAGGCGT AGACAACTAC
GACATTGCTG AATTCAGCAG GCGTGGTGTG ATGCTGACCA ACACGCCCGA CGTGTTGACA
GAAACCACGG CCGACACAGG CTTTGCCTTG ATCCTGGCTA CCGCCAGGCG GGTGGTGGAG
CTGGCGAACT GGGTGCGTGA CGGCCGCTGG CAGGCCAACT TGGGGCCGGC GCATTTTGGC
AGTGATGTGC ACGGCAAGAC GCTAGGCATC GTCGGCATGG GCCGCATCGG CGAGGCCCTG
GCCCGGCGCG CGGCCGCTGG CTTTGGCATG CGCGTGCTGT ATCACAGCCA GCGTGCCAAG
CCCGAGGTGG AAGCACGCTA TGCCGCATGC CAGTGCAGCC TGGATGAGCT GTTGCAGCAG
GCAGACTTCG TTTGCCTGAC GGTGCCGTTG AGCGCCAGCA CCGAAGGCCT GATAGGCGCA
CGGGAACTCG CGTTGATGAA GCCTGAGGCA ATCCTGGTGA ACATCTCACG CGGGCGTGTG
GTGGATGAGC AGGCGCTGAT CGAAGCGCTG CGGGCCAGGC GCATCCGCGG AGCGGGGCTG
GACGTGTTCG TGCACGAGCC ACTGCCGACC GACTCGCCGC TGTTGCAGCT CGATAACGTG
GTAGCGACCC CACACATCGG CTCGGCGACC GAGGACACCC GCCAGGCCAT GGCGCGTTGC
GCGGTGGACA ACCTGCTCAG CGCGCTGGCC GGTGAGCGGC CGGTAAACCT GGTCAACGGC
TGA
 
Protein sequence
MKKRIVLYKR LSDDLMARLQ DRVEVTWVDT TQPDGLARLR DALPGAHGLL GASLRLDASL 
LDLAPQLEVV SSVSVGVDNY DIAEFSRRGV MLTNTPDVLT ETTADTGFAL ILATARRVVE
LANWVRDGRW QANLGPAHFG SDVHGKTLGI VGMGRIGEAL ARRAAAGFGM RVLYHSQRAK
PEVEARYAAC QCSLDELLQQ ADFVCLTVPL SASTEGLIGA RELALMKPEA ILVNISRGRV
VDEQALIEAL RARRIRGAGL DVFVHEPLPT DSPLLQLDNV VATPHIGSAT EDTRQAMARC
AVDNLLSALA GERPVNLVNG