| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2376 |
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| Symbol | |
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| ID | 5192124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2709864 |
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| End bp | 2711648 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586833 |
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| Product | gluconate 2-dehydrogenase acceptor subunit |
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| Protein accession | YP_001267699 |
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| Protein GI | 148547597 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.406153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG TGTTGAACAA AGTGGATGCG GTGATCGTCG GCTTCGGCTG GGCCGGTGCG
ATCATGGCCA AAGAGCTGAC CGAGGCCGGG CTGCACGTGG TAGCCCTGGA GCGGGGGCCG
ATGCAGGATA CCTACCCCGA AGGCAGCTAC CCGCAGGTGA TTGATGAGCT GACCTACAGC
GTGCGCAAGA AGCTGTTCGT CGATGTATCG AAAGAAACCG TCACTGTCCG CCATAGCGTG
AATGATGTGG CATTGCCCAA TCGCCAGCTG GGCGCATTCC TGCCGGGCAA GGGCGTGGGG
GGCGCGGGCC TGCACTGGTC GGGTGTGCAC TTCCGGGTCG ACCCCGTCGA GTTGCGCCTG
CGCAGCCACT ATGAAGAGCG CTACGGGCGC ACGTTCATTC CCGAAGGCAT GACCATCCAG
GACTTCGGTG TCAGTTACGA AGAGCTGGAG CCCTATTTCG ACTTTGCCGA AAAGGTCTTT
GGCACTTCGG GCCAGGCCTG GACCGTCAAA GGCCAGGTGG TCGGTGAAGG GAAGGGCGGC
AACCCCTATG CGCCGGACCG TTCCAACCCG TTCCCGCTGC CCGCGCAGAA GAACGTTGTA
TCGGCAAGGC TGTTCGAAAA GGCTGCCACC CGCCTTGGCT ACAAACCCTA CAACCTGCCG
TCGGCCAACA CCTCCGGGCC ATACACCAAC CCCTACGGGG CGCAGATGGG GCCGTGCAAC
TTCTGCGGTT TCTGCAGCGG CTACGTGTGT TACATGTACT CCAAGGCCTC GCCCAACGTG
AATATCCTGC CGGCGCTGCG CCAGGTGCCC AACTTCGAGT TGCGGCCCAA TGCCCATGTG
CTGCGGGTGA ACCTGGACGA CCGCAAGCGC AAGGCCACCG GCGTGACCTA CATCGATGCC
CAGGGGCGCG AGGTGGAGCA ACCGGCAGAG CTGGTGATTC TGGCGGCTTT CCAGTTCAAC
AACGTGCGTC TGATGCTGCT TTCCGGCATT GGAAAACCTT ACGATCCGGT GAAGAACGAA
GGTGTGGTCG GGCGTAACTT CGCCTATCAG AACATGGGGA CAGTCAAGGC GTTCTTCGAC
AAGGACACCT ACACCAACAA CTTCATCGGC GCGGGTGGCA ATGGCATTGC CATCGACGAT
TTCAACGCCG ACAACTTCGA CCATGGCCCG CACGGCTTCG TCGGCGGTTC GCCAATGTGG
GTGAACCAGG CCGGTAGCCG GCCGATTGCC GGTACCTCCA ACCCGCCGGG CACGCCGGCC
TGGGGCAGTG CCTGGAAGAA AGCCACGGCC GACTACTACA CCCACCAGGT GTCGATGGAC
GCCCACGGCG CCCATCAGTC CTACCGTGGC AATTACCTGG ACCTGGACCC CACCTACCGC
GATGCCTACG GACAGCCGCT GCTGCGCATG ACGTTCGACT GGCAGGAAAA CGACATCAAG
ATGAACCAGT TCATGGTCGA CAAGCTGAGC AAGATCGCCC AAGCGATGAA CCCCAAGGCC
ATTGCCGTGC TGGGCAAGCA GGTCAAGGAC CACTTCAACA CCGCCAGTTA CCAGACCACC
CACCTGAACG GCGGGGCGAT CATGGGCACC GACCCCAAGA CCAGTGCACT GAACCGCTAC
CTGCAAAGCT GGGACGTACA CAACGTGTTC GTTCCGGGCG CTTCGGCGTT CCCGCAGGGG
CTGGGTTACA ACCCGACCGG GCTGGTGGCT GCGCTCACCT ACTGGTCGGC CCGCGCCATC
CGTGAGCAGT ACCTGAAAAA CCCCGGTCCG TTGGTCCAGG CTTGA
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| Protein sequence | MATVLNKVDA VIVGFGWAGA IMAKELTEAG LHVVALERGP MQDTYPEGSY PQVIDELTYS
VRKKLFVDVS KETVTVRHSV NDVALPNRQL GAFLPGKGVG GAGLHWSGVH FRVDPVELRL
RSHYEERYGR TFIPEGMTIQ DFGVSYEELE PYFDFAEKVF GTSGQAWTVK GQVVGEGKGG
NPYAPDRSNP FPLPAQKNVV SARLFEKAAT RLGYKPYNLP SANTSGPYTN PYGAQMGPCN
FCGFCSGYVC YMYSKASPNV NILPALRQVP NFELRPNAHV LRVNLDDRKR KATGVTYIDA
QGREVEQPAE LVILAAFQFN NVRLMLLSGI GKPYDPVKNE GVVGRNFAYQ NMGTVKAFFD
KDTYTNNFIG AGGNGIAIDD FNADNFDHGP HGFVGGSPMW VNQAGSRPIA GTSNPPGTPA
WGSAWKKATA DYYTHQVSMD AHGAHQSYRG NYLDLDPTYR DAYGQPLLRM TFDWQENDIK
MNQFMVDKLS KIAQAMNPKA IAVLGKQVKD HFNTASYQTT HLNGGAIMGT DPKTSALNRY
LQSWDVHNVF VPGASAFPQG LGYNPTGLVA ALTYWSARAI REQYLKNPGP LVQA
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