Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2372 |
Symbol | |
ID | 5191718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2706245 |
End bp | 2707093 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640586829 |
Product | hypothetical protein |
Protein accession | YP_001267695 |
Protein GI | 148547593 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAG AGTCCGACCG CACTGGCAAA CCAGTGCCCA CCCCCCAAAA GCCAATCCTG CTCGAAGACA TAAACGAAAC CCCACCGCCT CCTGACGGCG CGGGTCCTGA ATACGCAACC GATCTACCCG GCTACCCGGC CGATCCAGAC TTTCAGCTAC GCGGCGGCTA CGACAACCTC ATGCTCGACG CGGCAAGCCA GCTGTTCGGC CTGGTCATTC GCCTACGCAC GCTGGATGAC CTGCCCAACA TCCAGTTCGT GCACAAGACC GTGCAAACAC AGGTCAGTAC TATTCGCGAA GAAATGCGAC AGCACGGCTA TTGCGCGGTC CATCAGGAAG TCTATTCCTA CGCCCTGTGC CTGCACCTGG ACGAGGCCGT GATGACCCGC CCCTGGGGCC AGAACTCGTG CTGGAGCCAC GAACCGCTGC TGAGCATCTT CCACGACGAA ACCCAGGGCG GCGAAAAGAT CTTCGTGCTG CTCGAGCGCA TCATGCAATC GCCAAAGGAA TTCCAGGATG TGCTGGAGTT CCTGTACTTC TGCTTTTGCC TGGGCCTGCA AGGCAAATAC GCCCTTGACC CCAAGGGCGA TGAAATCCTC AGCGCGCTGA TCAGCCGGAT GCACAAGGTC ATTCGCCAAC TGCGTGGCCC CACGCCGCAA ACAGTGAGCG ACCCCTATAG CAACGTCGTC CATTGCCCCC ACCGTATGCG CCGCTGGCAG TGGCCCTGGT GGACCCCGCT GGTCATTTCG GTCATCGCCA TGGTCTGCGC GTACAGCTAC TACAGCTACC GCCTCGACCT GCTAACCGCC GAAGTCCTCG AATCGCTCAA CGCCATTCTG CAACAGTAA
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Protein sequence | MPKESDRTGK PVPTPQKPIL LEDINETPPP PDGAGPEYAT DLPGYPADPD FQLRGGYDNL MLDAASQLFG LVIRLRTLDD LPNIQFVHKT VQTQVSTIRE EMRQHGYCAV HQEVYSYALC LHLDEAVMTR PWGQNSCWSH EPLLSIFHDE TQGGEKIFVL LERIMQSPKE FQDVLEFLYF CFCLGLQGKY ALDPKGDEIL SALISRMHKV IRQLRGPTPQ TVSDPYSNVV HCPHRMRRWQ WPWWTPLVIS VIAMVCAYSY YSYRLDLLTA EVLESLNAIL QQ
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