| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2371 |
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| Symbol | |
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| ID | 5190801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2704054 |
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| End bp | 2706231 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586828 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001267694 |
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| Protein GI | 148547592 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC AATCCGATTT GCGCTTCACT TTCCAGCCGC TGGTTGGCCG AAGCGAGTTT
GAGGTGGTGT CGTTCGAGCT GGACGAAGCC ATCAGCTCAC CGTTCCAGCT GCAGCTGGAG
CTGATCAGTT TCGAAGACGA TGTCGACTTC GGCCAGCTCC TCGACAAACC GGTGCTGTTC
ACCCTGTGGC AGGGTGAGCG CCCGTTGCGC TACGTGCACG GCCTGGTCAG CACCTTCAGC
CAGGGTGAAA CAGGCTTCCA TCGCACCCGT TACCGCGCAC TGGTCGAGCC CATGCTGGCC
CGCGCCGGGC TGCGCTCGAA CTGGCGCATC TTCCAGCAGA AAACCGTGCC GCAGATTCTC
GAGATCATGC TCAAACGCCA AGGCGTGAAT GCCTACGAGC TGAAGTGTCT CGACCCGCAT
CAGGTGCGCG AATTTTGCGT GCAGGCCGGT GAAACAGACC TCGACTTCAT GGCCCGCCTG
GCCGCCGAGG AAGGCATTGT CTACCGCTTC GAACACACGC CGAAACAGCA CTTGCTGGTC
ATCACTGACC GGCTGCTGGC GCTGGGCCAG ATCAGCCGGG GGGCCATCAA GACCCATGAT
GAGGATGAAG GGTTTCGCGA TGACGACGTG GGCCCCGATC AGGTGCTGTA CCGATCCGTT
GGAGGCGGCG ATCAGGCCAG GCCTTGCCTG CGGCGCTTGC GTTACAGCGA ACAGGTGCGA
ACAGCGCAGC AGGTGCAACG GGACTACACC TTCACTCATC CGCAATACCG TCAGGAACAC
CAGGCGTACG ACAATAGCAA CACCCATCAA TCGCTGAACT ATGAGCGCTT CGACTACCCC
GGCCGATACA AGCGTGATGC GGTCGGGGTT CCGTTCACTG CCACCCGCCT TACGGCCCTG
CGCCATGATG CGCGCATTGC CGAAGTGGAA GGCGACGATG TGCGCCTGCA ACCGGGGCTG
AGCTTCACCC TCATCGAGCA CCCGCGTGAA GACCTCAACG TGCACTGGCG CACGGTCAGC
GTGCATCACG AAGGCACCCA GTTCACCAGC CTGCAGGAAG AGGCCGCCGG CTCGCAGCAA
GGCACCCGCT ACAAACAGGA AGCATTGCTT GTTCCCGGCA GGGCCGAATG GCGCCCGGCC
CCCCTGCCCA AGCCACGCAT TGACGGCCCG CACATGGCGA CGGTGGTCGG GCCCAAGGGC
GAGGAAATCT ATTGCGACCA ATGGGGCCGG GTGAAAGTGA GCTTTCCTTG GGACCGGGAA
AGCGAAAACA ACGAGTTCAG CTCCTGCTGG GTGCGCGTGT CGCAAGGTTG GGCGGGGGGC
AGCTGGGGTT CGATGGCCAT CCCGCGCATC GGCCAGGATG TGATCATCCA GTACGTCAAC
GCCGACCCGG ACCAGCCGAT GATCACCGGG CGCACCTATT GCGGTAACCA GTTGCCGCCC
TATGAGCTGC CCGAGCACAA GACGCGCATG ACCATCAAGA GCCAGACCCA TAAAGGCGAA
GGCTTCAACG AGCTGCGCTT CGAGGATGAA CTGGGTCGGC AGGAGGTGTT CATTCATGCC
GAGCGGGACC AGAACAACAT CGTCAAGCAC GACGAAACCA CACGCGTGGG TAACGATCGT
ACCGAACGCG TCGAACGAGA CGAGACGATT TCGATCGGTC AGGACCGTCG CGAAGACATC
GCCCGTGACG AATCTGTTGG CATCGGCCAG AACCGGGTAC ACGAAATCGG CAACGACGAC
AGCCTGAGCA TCGGCCGCAA CCACAGGATC ACCACAGGCA AGGATCGAAT CGAACAGGTA
GGGAACCACC GGCAGGACAT CACCAAGGCA AACCACACAG TAGAAATCGG CGGCCACCTC
GAACAGGTCG TTGCCGGTCA CAGCACGTTG CAAACGGGCG AAGCCATCCG GCACACCACC
AAGGTTTATG ACATCCAGGT CAGCGAAAGC CTGACGATCC GCAGCCCCGC GGGGCTTCTG
AGAGTCGACG GCGCCGGTAT CACGCTGGAC GGCCTGGCGC TGGCCTTCAA AGGGCCTGTC
AGCCAGCAGG CTACGGGTAG CAATCGCGTC ACTTCAACGT CTGGCGTACC GGCGCCGGGC
GAACCCATTT GCCTCAGCTG CCTGCTCAAA GCGATCGCCG ACGGCCACAC CATCATTCGC
ATGGAAGGAG CAAGCTGA
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| Protein sequence | MPSQSDLRFT FQPLVGRSEF EVVSFELDEA ISSPFQLQLE LISFEDDVDF GQLLDKPVLF
TLWQGERPLR YVHGLVSTFS QGETGFHRTR YRALVEPMLA RAGLRSNWRI FQQKTVPQIL
EIMLKRQGVN AYELKCLDPH QVREFCVQAG ETDLDFMARL AAEEGIVYRF EHTPKQHLLV
ITDRLLALGQ ISRGAIKTHD EDEGFRDDDV GPDQVLYRSV GGGDQARPCL RRLRYSEQVR
TAQQVQRDYT FTHPQYRQEH QAYDNSNTHQ SLNYERFDYP GRYKRDAVGV PFTATRLTAL
RHDARIAEVE GDDVRLQPGL SFTLIEHPRE DLNVHWRTVS VHHEGTQFTS LQEEAAGSQQ
GTRYKQEALL VPGRAEWRPA PLPKPRIDGP HMATVVGPKG EEIYCDQWGR VKVSFPWDRE
SENNEFSSCW VRVSQGWAGG SWGSMAIPRI GQDVIIQYVN ADPDQPMITG RTYCGNQLPP
YELPEHKTRM TIKSQTHKGE GFNELRFEDE LGRQEVFIHA ERDQNNIVKH DETTRVGNDR
TERVERDETI SIGQDRREDI ARDESVGIGQ NRVHEIGNDD SLSIGRNHRI TTGKDRIEQV
GNHRQDITKA NHTVEIGGHL EQVVAGHSTL QTGEAIRHTT KVYDIQVSES LTIRSPAGLL
RVDGAGITLD GLALAFKGPV SQQATGSNRV TSTSGVPAPG EPICLSCLLK AIADGHTIIR
MEGAS
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