| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2369 |
|---|
| Symbol | |
|---|
| ID | 5190676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2700489 |
|---|
| End bp | 2703161 |
|---|
| Gene Length | 2673 bp |
|---|
| Protein Length | 890 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640586826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001267692 |
|---|
| Protein GI | 148547590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCAC TCAGCGAAAC CCTCGAACTG TGCAGGCGCA TCACCTCCGG CTACCGCCCG
GCCCTGCGCA ACAGCCCCGT CGCCGACTGC ACCCGCCGCT TCGAACTGCT GCCCCTGCGC
TACGCCGCCG TCGGCGGCAA CCCGGCACAA CGTGCCCGCC TGCCCAAATT GCCGGGCTAT
CTCAGCCCGT TCCAGGAGGT CGGCGAGCTG ACCCATTCCA GCTACGCCAT CCGCCCTTTG
CGCGAGGGCT TTCTCTACCT GCTGATCAAG CGCCATAGCG CACCGGCCTA CGAATGGCAC
AGCCAATACC GCGTGGCGCC CAATGGCTCG CTGCTGTACA TCAGCAGCGA CGCCCCCTGG
GCGCCTGCCC CCAGCGCCGG CAATCTGGAT GAGATCCTTC GCGGTTTCGG CTGGACCATC
ACCCTCTACG ACCTGGATGA CATCCAGGAG CTGCGCCCAT TGTTCAGCCC TTCCCCGCTG
ACCCCGCGCA TGCTCGACAA CTACCGCCTG CTCGACGAGG AATACCGCAG CAGCCTGCCC
ACGATCGATA TCGCCCGCTT CATCCAGCCT TCCGACGCCC CGCCACAGCC CCACGTCCTC
AAGCATGACC AACTGAACTG GGTGGCCGAC TTCAAGGCCC AAAACGATGC AGACCTGCAG
GCACTGCTGG ACCTGCAGCC GTTCAACAAC GACCAGATCG TCTCGCCGCA CGCATCACGC
CAAGCGCTGG CACCGCTGGT GAACCACAGC AAACCCCGTG GCGCCGCCAT CGTCATCGAA
GACGCCATCG GGATCACCCA GGAGCTCAAC GCCTGGCGCA ACGCCGCTGT CGAGGATGTG
AAGACCCAGT GGCTGGCGCG CACCGTGGAA CCCGGGGTGG ACAACGAACG CAAGCTGCTG
GTCGCGCAGT CGTTCCTGGA AATCGAAAAA CTCTACCCGC AGATGATGGC CGAGCAGATC
GTCAAGCGCG AAGTCATGGC CGAAAAAGTC CGCAACCAGC CCCACCTGCA TCCCGAGATC
TACTTGTTCT CCGAACGGGC CAATCAACAG GCCGATGCCC ATGATGAACG CATGAAGCCC
CACCTGGCGC AGTTCGAGCG CGAGGTCCGC AGCAAAGTCC AGGCCCGCCA GGATGCCGGC
GAGTTCCGCA AGCGGTTCGA CCAGAAATAC GGCCACCTGG TCGACCGCCA GGCCATGCAC
GATCAGCTCG ACGGTTTCGA GCAGGCCATG CAACACGCCC AGCAAGCCGC CGAAGACCGC
GCCAACGACC ATGCCCGCTG GGTGGTCAGC GAACGCTTGT TGCAGGCACT GGACCGCTAC
GACAACGCCG ACCTCATCAA CGGCCTGGCC TTTGCCGAAC AGACCGGCCA GTGCGTGATC
GGCATGGAGT TGAGTGAAGG GGGCACGAAG GTGCTGGACC ACTGGTGGCG CAGCGACGTG
GCAGACCGGG GCAACCTGGC AATACGCGGC ATCACCTACA ACCAGGAGGA CCTGCGGGAA
GCACTGGCGG CGCTGCTGGA AGCCGCCAAG GCCGAACCGT CGTCAGCGTC ATCCTTCGCC
CTGCCGGAAG CACTTGCCCG GCAAGCCCAT GCCGCTGCCA ATGCCTTTGG GCGCATCAAC
ACCCTGTACG AACAGATGCA GGCACAGAGC AGCACGGCCA GCATCGGCCT GTATGCCTGG
TACGTCGCCC TGGGGCGGCA AGTGCTGCGC ACCGCGACCC CCAACAGCAT GGACCGCGCA
CTGCACCAGG GTTTGCGGCT GACCTTGTTC GCTTCGGTGC ATGAAACGGC TGTCGATATT
CGCCTGAGTG AAGCTGCACG TAGCGGGCAG CCCATTAACC CACAACGCAG TGCAGGCCAG
GTATCAAGGT ACCTCGACCA GGCCTGGGCT GAAGGGTTGA TGCAGGCCCG TAACAGTGAC
TTCTACAAAG TGCGTGTCTC CGGGCTGGTG TGCCTGCTGG AAGGGATGCT GATGGCCTTC
AAAGCGCGCG AACTGCCTGA CAGTGATGCG CGGGTGAAGA CCGAACTCCT GGCGGCCGCG
ATGACCACGG CAGCGGCGGG CTTTGAAATT GGAGCCAGCT ATGTGGACCA GGTGGTCGCG
CGGTACGGCG CGAACAGTGT GACCGGACGA GGAGCAGCGG CCGCTTTAGG GCGTTTGAAA
CTATGGGGCG CCAGTTTAGC TGGCACCGGG GGGTCACTGC TGGCGTGGTG GGATTTCACT
GATTCGGTTG AGCATTTCAA AAGCAGCCAG AGTGGCGCTA CCAAGCAGGT TGAAAAAAAC
TCCAGACTCT TGGCGGCTAC TTATTTTGTA AGAGGGGTCG CTACAGTGAC TCTCTCACTT
GCTGAGTTAG GAACGGCCGT TGCGACTGCA AAACCTTTTT TCGACTACCT TTCTCAAAAT
GCCAAGACCA AGCTCGTCAG GACGCTATCC ACCTCCTTGG GAGCACTTGC AAAAAAGCTC
GGCACGCAGG CTGCTCGATT ATTACTTGCG CGCCTCGTTC TTGGGGCGTT CTGGATTGGC
CTGGTCTTCA CATTGATTAT TTACATATTT GAAGACGATG CTTTGGAAAA GTGGTGCAAA
CGCAGCAGCT TCCGCCTTGC AAAAAACTCA AAACCGTTTG AAGAACAAGA AGAGCTGAAG
ACCCTGCATT CCGCATTCAG CGAGGTATTG TGA
|
|---|
| Protein sequence | MDSLSETLEL CRRITSGYRP ALRNSPVADC TRRFELLPLR YAAVGGNPAQ RARLPKLPGY
LSPFQEVGEL THSSYAIRPL REGFLYLLIK RHSAPAYEWH SQYRVAPNGS LLYISSDAPW
APAPSAGNLD EILRGFGWTI TLYDLDDIQE LRPLFSPSPL TPRMLDNYRL LDEEYRSSLP
TIDIARFIQP SDAPPQPHVL KHDQLNWVAD FKAQNDADLQ ALLDLQPFNN DQIVSPHASR
QALAPLVNHS KPRGAAIVIE DAIGITQELN AWRNAAVEDV KTQWLARTVE PGVDNERKLL
VAQSFLEIEK LYPQMMAEQI VKREVMAEKV RNQPHLHPEI YLFSERANQQ ADAHDERMKP
HLAQFEREVR SKVQARQDAG EFRKRFDQKY GHLVDRQAMH DQLDGFEQAM QHAQQAAEDR
ANDHARWVVS ERLLQALDRY DNADLINGLA FAEQTGQCVI GMELSEGGTK VLDHWWRSDV
ADRGNLAIRG ITYNQEDLRE ALAALLEAAK AEPSSASSFA LPEALARQAH AAANAFGRIN
TLYEQMQAQS STASIGLYAW YVALGRQVLR TATPNSMDRA LHQGLRLTLF ASVHETAVDI
RLSEAARSGQ PINPQRSAGQ VSRYLDQAWA EGLMQARNSD FYKVRVSGLV CLLEGMLMAF
KARELPDSDA RVKTELLAAA MTTAAAGFEI GASYVDQVVA RYGANSVTGR GAAAALGRLK
LWGASLAGTG GSLLAWWDFT DSVEHFKSSQ SGATKQVEKN SRLLAATYFV RGVATVTLSL
AELGTAVATA KPFFDYLSQN AKTKLVRTLS TSLGALAKKL GTQAARLLLA RLVLGAFWIG
LVFTLIIYIF EDDALEKWCK RSSFRLAKNS KPFEEQEELK TLHSAFSEVL
|
|---|
| |