| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2332 |
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| Symbol | |
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| ID | 5190425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2657536 |
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| End bp | 2659599 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586789 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001267655 |
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| Protein GI | 148547553 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCGCAA ACGGTACGCC ACGCGAGCCT GCGTCGCAGG TCATCCTGCA GTCGCCTGTT
TTGCCATTGA TCGCGCCGAT GGGGGAGCGT ATTGCCCAGT TCGACTGGTG GCGTACCTCG
CTTGGGCCAT TGTCGCGCTG GCCAGCTTCG TTGCGCATTG CCGTGGACAT GATGCATTTG
TCACCCTTCC CGTGTGCGGT GGTCTGGGGG CCCGACCTGT GTGTAGTGCA TAACGATGGC
TACCGGGCGT TGCGGGCATT ACCGGATGCG CTGGGCATGG CGTTCGATAC CCTGTGGAGT
GATATCTGGC CTGCAGTGGG ACCCTGGGTG TTCAAGGCAC TGGAAGGCCA GTCGAGTTTT
GTCGAGGACC TACCCTTGCG TATCGTCCGC AGTGAAGGCG CCGAACCGCT ATGGTGCGCA
TTCGGTTATG CCCCCCTGCA CGATGAACTC GGTAACGTGG CGGGGTTTCT GCATACGGTG
ATCGAGACCA CGGCCAGCGT CGAGGCCCAC CGCCATTGGC GTGAGCAGGT GCAGAGCTTT
GAACGCCAGG TTGAGCAGCA TGTGGCCGAG CGAGAGCAGT TCTGGTTGCT GTCGCGCGAA
GCGATGATGA TGCTCACCCC TGAATTGAAA CTGCATGCTG CCAACCCGGC CTGGTACCGC
ATTCTGGGCT GGACAGAAGA ACACGTGCAG GCGATGTCGG TGATGCAGCT GGTGCACCCG
ACAGAGCGTG CCGAAGTGCA ATTGGCAGTG TCCGAGCTGC TGCAATGCAG CCACGCGGAG
CAGTTGGAGA TCCGCCTGCG ACACCGCGAT GGTCACTACC ACTGGTTTCG CTGGAGTGCG
CGGTTTGACG GCAGCCTGCT GACTGCGGTT GGCCGCGACA TCACCGCAGA CCGTGAGGAG
GCTGCGCGTC AGGCAGAGAT GCTGATGCAC AACAGCGAGC GTATGGAGGT GGTTGGCCAG
TTGGCAGGCG GCATGGGCCA TGAAATGAAC AACTTGCTGT CCGGTATCGG TGGCAGCCTC
GAACTGCTGC AGCGGCGCCT GCAGGAGGGG CGGCTGGAGC GTGTGGAGGC CTACGTGGAC
GTTGCGCGCG ACGCGGTACA GCGGGCCATG GACCTGACCC ATCGGTTGAT CGCATTTTCC
CGCCATCAGC CACTGGCCCC TCGGCCACTG GACTTCAAGC GGCAGTTACG TTTGAGCGAA
CCCCTGTTGC TGCGGGCGTT GGGGGCAGAA ATGCGTTTGC ACTGGCAACT GGACATTGCA
CCTTGGGCAG TGAGCCTGGA CGTGCCCCAG CTCGAGAATG CCTTGGTCAA CTTGTGTGCC
AATGCGCGTG AAGCGTGCCT GGAACAAGGG AATGTCACCA TCAGCAGCGT GAACGAACGG
CTGACTGCGT TTTTCCCGGA TGAAAGTGGC TTGCCGCCAG GCGACTATGT GGCGTTGCAT
GTCGAGGATG ATGGCCATGG CATGGCAGTG GTGGATATCG CCAGGGCTTT TGAGCCGTTT
TACACAACCA AACCTCTCGG GCGTGGGGCC GGGCTTGGTC TGTCGATGGT ATATGGCTTC
GTCCGTCAGT CGGGCGGGTA TGCCTGGATC GAGTCGGCGC CAGAGCAGGG CACCAAGGTG
TCCATGCTTT TCCCCAGGTG CCATGAGCCG GTTCCGGATG AGCCCGTGCC GGTACCGCTT
TCGCAGCACA TGGCACTGGG CAAGCGCCTG CTGCTGGTGG ATGACGCGCT TGATCTGCGC
GCGGTCATGC GCGAGTACCT GACTGAGCGT GGATTTGACG TCACGGATGT GGGCGATGCC
AATAGCGCAC TGGAGCGCTT CCGCCATGGC GGCCCTTTCG ATCTGGTCAT CACCGATATC
GGATTGCCGG GCGGGTTCAG TGGCCGGCAA GTGGCGAAGG CCATGCGCAT GCAGCTTGCA
CAGCAGAAAA TACTGTTCAT CACCGGTTAT GCGGATCAGA CCATTGAAGC GCAATTGCTC
GATCAGCCGG GCACGGCATT GTTGAACAAG CCGTTTTCGC TGGCGCTGCT TGCCGATGAG
GCGCTACGCA TGCTTGAGGC GTAA
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| Protein sequence | MVANGTPREP ASQVILQSPV LPLIAPMGER IAQFDWWRTS LGPLSRWPAS LRIAVDMMHL
SPFPCAVVWG PDLCVVHNDG YRALRALPDA LGMAFDTLWS DIWPAVGPWV FKALEGQSSF
VEDLPLRIVR SEGAEPLWCA FGYAPLHDEL GNVAGFLHTV IETTASVEAH RHWREQVQSF
ERQVEQHVAE REQFWLLSRE AMMMLTPELK LHAANPAWYR ILGWTEEHVQ AMSVMQLVHP
TERAEVQLAV SELLQCSHAE QLEIRLRHRD GHYHWFRWSA RFDGSLLTAV GRDITADREE
AARQAEMLMH NSERMEVVGQ LAGGMGHEMN NLLSGIGGSL ELLQRRLQEG RLERVEAYVD
VARDAVQRAM DLTHRLIAFS RHQPLAPRPL DFKRQLRLSE PLLLRALGAE MRLHWQLDIA
PWAVSLDVPQ LENALVNLCA NAREACLEQG NVTISSVNER LTAFFPDESG LPPGDYVALH
VEDDGHGMAV VDIARAFEPF YTTKPLGRGA GLGLSMVYGF VRQSGGYAWI ESAPEQGTKV
SMLFPRCHEP VPDEPVPVPL SQHMALGKRL LLVDDALDLR AVMREYLTER GFDVTDVGDA
NSALERFRHG GPFDLVITDI GLPGGFSGRQ VAKAMRMQLA QQKILFITGY ADQTIEAQLL
DQPGTALLNK PFSLALLADE ALRMLEA
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