| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2318 |
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| Symbol | |
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| ID | 5195455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2640467 |
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| End bp | 2642026 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586775 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001267641 |
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| Protein GI | 148547539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCT TCAGTGTCCC TCGTACTACC GTCACCCCCC AGCAACTGCT GTCGGAGCAG
GTGCGGCGCA TTCTTGCCGC GCCGGTGTAC GACCTGGCCA TCGAAACGCC CCTGCAAGCG
GCCCCGGCCT TGTCTGCCGC CCTGGGCAAC CAGGTGTTGC TCAAGCGCGA AGACCTGCAG
CCTACGTTTT CGTTCAAGAT CCGCGGTGCC TACACCCGCC TGTCGCGTCT GACCGATGTG
CAGCGTGAGC GCGGGGTGAT CACCGCTTCG GCGGGCAACC ATGCCCAGGG CGTGGCCTTG
GCGGCATCGC ATCTGGGTAT CAAAGCAACG ATCGTCATGC CCACCACCAC GCCATCGTTG
AAAGTGGAAG GCGTGCGTTC GCGCGGCGGG CATGTGGTGC TGCATGGCGA GAGCTTCCCG
CATGCGCTGG CCCATGCACT GAAGCTGGCC GACAGCGAAG GCGCGACCTT CGTGCCACCG
TTCGATGACC CGGATGTGAT CGCCGGGCAG GGTACCGTGG CCATGGAAAT CCTCCGTCAG
CGCCCGGGGG CGCTGGACGC GATCTTTGTG CCCGTGGGCG GTGGTGGGTT GATCGCCGGG
ATCGCCGCCT ATGTGAAGTA CCTGCGCCCT GAGGTGAAGG TGATCGGCGT CGAACCGGTG
GATTCCAACT GCCTGCAGGC TGCCATGGCC GTCGGCGAAC GCGTGATCCT GCCGCAGGTC
GGCACCTTTG CCGATGGCGT GGCGGTGGCG CAGATCGGCG CCCATTGCTT CGAGCTGTGC
CGCCACTTCG TCGACGAGGT GGTGACGGTG AGCAGTGACG AGCTGTGCGC GGCGATCAAG
GATATCTACG ACGACACCCG TTCGATCACC GAGCCGTCCG GGGCCTTGGC CGTGGCCGGG
ATCAAGAAGT ACGTGGCGCG TGAAGGTGTG CAGGGGCAGA CCCTGGTGGC CATCGACTCC
GGGGCCAACG TCAATTTCGA CCGCTTGCGC CACGTGGCCG AGCGGGCCGA GCTGGGCGAG
CAGCGCGAGG CGATCATCGC CGTGACAATT CCGGAACAGC CGGGCAGCTT CCGGGCCTTT
TGCCAGGCAC TGGGCAAGCG GCAGATCACC GAATTCAACT ACCGCTTCTA CCCTGGCAAG
GAGGCGCGCC TGTTCGTGGG CGTGCAGACC CACCCGGTGC ACGACCCACG TGAGCAGTTG
CTGGCCAGCC TGCGGGAGCA GGGGTACAGC GTGCTGGACC TGACCGACAA CGAGCTGGCA
AAGCTGCATG TGCGCCATAC CGTGGGCGGG CATGCCGCGT CAGGGGCTGA TGAGCGGGTC
CTGCGCTTCG AGTTTCCCGA ACGGCCAGGG GCGTTGCTGG GGTTTCTGGA GCGGTTGGGC
AAACGTTGGA ACATCAGCCT GTTCCATTAC CGCAACCATG GTGCGGCGGA GGCGCGGGTG
TTCGCTGCTT TGGAAGTGCC AGCGGACGAA TTGGCGAGCT TGCCGTTGAC GCTGGACGAG
ATGGGGTACC GGTATTGGGA CGAGACTGAC AACCCGGCGT ACAAGCTGTT CCTGGGCTGA
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| Protein sequence | MTSFSVPRTT VTPQQLLSEQ VRRILAAPVY DLAIETPLQA APALSAALGN QVLLKREDLQ
PTFSFKIRGA YTRLSRLTDV QRERGVITAS AGNHAQGVAL AASHLGIKAT IVMPTTTPSL
KVEGVRSRGG HVVLHGESFP HALAHALKLA DSEGATFVPP FDDPDVIAGQ GTVAMEILRQ
RPGALDAIFV PVGGGGLIAG IAAYVKYLRP EVKVIGVEPV DSNCLQAAMA VGERVILPQV
GTFADGVAVA QIGAHCFELC RHFVDEVVTV SSDELCAAIK DIYDDTRSIT EPSGALAVAG
IKKYVAREGV QGQTLVAIDS GANVNFDRLR HVAERAELGE QREAIIAVTI PEQPGSFRAF
CQALGKRQIT EFNYRFYPGK EARLFVGVQT HPVHDPREQL LASLREQGYS VLDLTDNELA
KLHVRHTVGG HAASGADERV LRFEFPERPG ALLGFLERLG KRWNISLFHY RNHGAAEARV
FAALEVPADE LASLPLTLDE MGYRYWDETD NPAYKLFLG
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