Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2314 |
Symbol | |
ID | 5191562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2636184 |
End bp | 2637359 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640586771 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001267637 |
Protein GI | 148547535 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTACTA CCCTCTCCCC GTGCCTGCGC CCGTTGGCGC TCATGGCATT GCTGAGCCTG TCCCTGGCCG GCTGCAGCGA CAGCGCCGAG CCAGACGACC AGGCCCCCAC TGCGCAAGTG CGCGTGGAAA CCCTGCAACT GCAGCCACTG GCCATCAGCA GCGAACTCAG CGGCCGTATC CTCGCGCCAC GCACCGCCGA AGTGCGTGCG CGGGTCGCAG GCGTGGTGCT CAAGCGGGTG TACCGCGAAG GCAGCGACGT CAAGCAGGGT GATGTACTGT TCCTGATCGA CCCGGCACCG TTCAAGGCCG ACCACGATAG CGCCCGCGCC ACGCTGGCCA AGGCCGAGAC CACCCGGTAC CAGGCGCGCC TGCAAGAGCA GCGCTACCGC GAGCTGGTCG ACGACAAAGC CGTCAGCCGC CAGGAATACG ACAACGCCAA GGCCAGTTTC CTGCAGGCCG ATGCCGAAGT GGCCGAAGCC AGGGCGGCGC TGGAGCGCGC CCGGCTGAAC CTCGGCTATG CCACCGTGAC CGCGCCGATC TCCGGCCGTA TCGGCCGCGC CCAGGTCACC GAAGGCGCGC TGGTCGGGCA AAACGAAACC ACCCCGCTGG CGACCATCCA GCAACTGGAC CCGATCCATG CCGATGTCAC CCAGTCTACC CGTGAGCTCA ACGCGCTGCG CCGCGCCCTG CGCGCTGGCG AATTGCAGCA GGTGGGCGAC GGCCAGGCAC GCGCCACGCT GATCCAGGAT GACGGCAGCG CCTACCCGCT GCCGGGCAAG CTGCTGTTCT CCGACATCAG TGTCGATCCC AGCACCAACC AGATCACCCT GCGCAGCGAG TTCCCCAACC CGGACCTCGA CCTGCTGCCT GGCAGCTACG TGCGGGTACG CCTGGAGCAA GCGGTGCAAC CCAAGGGCCT GAGCGTGCCG CAACGCGCCA TCCTGCGTGA CAGCGCCGGT GTGCCGAAGG TGCTGGTGGT AGACCAGCAC GCCCGGGTCA GCGACCGCCA GGTTGTACTG GGCAGCGCCC AAGGCGACCG CTGGGTCGTC AGCGAGGGCC TGGCGGCCGG CGAACGGGTG GTGGTCGAAG GCCTGCAGCA CGTCAAGGCC GGTGACCAGG TGCAGGTCGA CAACGCACCC GCTGCCCCGC CCATCGCACA GCATACCGGC CAGTGA
|
Protein sequence | MPTTLSPCLR PLALMALLSL SLAGCSDSAE PDDQAPTAQV RVETLQLQPL AISSELSGRI LAPRTAEVRA RVAGVVLKRV YREGSDVKQG DVLFLIDPAP FKADHDSARA TLAKAETTRY QARLQEQRYR ELVDDKAVSR QEYDNAKASF LQADAEVAEA RAALERARLN LGYATVTAPI SGRIGRAQVT EGALVGQNET TPLATIQQLD PIHADVTQST RELNALRRAL RAGELQQVGD GQARATLIQD DGSAYPLPGK LLFSDISVDP STNQITLRSE FPNPDLDLLP GSYVRVRLEQ AVQPKGLSVP QRAILRDSAG VPKVLVVDQH ARVSDRQVVL GSAQGDRWVV SEGLAAGERV VVEGLQHVKA GDQVQVDNAP AAPPIAQHTG Q
|
| |