| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2301 |
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| Symbol | |
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| ID | 5190527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2616773 |
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| End bp | 2618683 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586758 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001267624 |
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| Protein GI | 148547522 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC AACTTATAAC AAACGCCCAC GACCCGCTGC ACGAATCCCG CGAGGCCCGC
CTGAAGCTGG TCAGCGAAGG CGAACTACCG CTGGGCATGC TGCGTGATGA GATCGACGCT
TCCTGGCGCC GCAGCCTGGG CCACGGCCTG GATTGCCTGC AGGGCGAACA GGTCGGCTTG
GGCTTGGAAC AGGGCCATGA CCTGCGCCTG CTGCTGGCGC GCAACCGCCT GTTGATCGAT
GCCGTTACCC CCGAACTCGA CTACCTGGTC GCGCGCCAGG GCAAGGCTGG CATCGTCATC
CTCGGCGATG CCCAGGCCAA CGTGCTGGCC ATCGAAGGCC AGAAGCACGT GCTGCAACGC
GAAGGCCTGC GCGATCTGCA CCCGGGCAGT TGCTGGAGCG AATCGCTGCG CGGCACCAAT
GCCATCGGCA CGGCCGTGGT CGAAGGCCGG CCGACGCTGA TCAACTGCGG CGAACATTAC
CTTGACCGCC TGAGCCCGTT CTCCTGTACT TCCGTGCCAC TGCGCGACCC GCGGGGCGAG
GTGATCGGCG TGCTCGACAT CACCCGCGAA GGGGTGATGG CGCAACCGCA GGACAGCCTG
TCGACCCTGA TGCTGGCGGC CGGCAACATT GAAAGCCGCC TGTTTGGCCT GTGCCACCCG
GACCAGTTGG TGCTGGCCTT CCACAGCCGC CCGCAGTACC TCAACAGTGC CTGGCACGGC
CTGTTGGCCC TGAGCCTGGA CGGCGAAGTG CTGGCTGCCA ACGACAGTGC CTGCCAGCTG
TTGCAGGTGC CGCGTCACGA ACTGATTGGT CGGCGCAGCA CCGACCTGCT GGGCGAACGT
TCCCCGGCCT TTATCGCTCG CCTGTGGCAG GGTGGGGTCA GCAGCGTGCA GACCGCCAAG
GGCGAGTTCT ATTTCCGTGC CCTACAGCTG CCGCGCCATG GCCGGGTAAC CCCCAGCACA
CCATCCAGCA AGCCGGCCTT GAGCAAACAG TCACCTGCAC TCGATGCTCT GGCCGGTGGT
GATCAACGCC TGGCGCGCAA CCTGCGCATG GCTCGCCAGG GGCTGGGCAA TGGTTTGCCA
GTGCTGCTGC TGGGCGAAAC CGGTACCGGC AAGGAAGTGG TCGCTCGCGC CTTGCACCAG
GCCAGCCCGC GTGCCGACAA ACCGTTTGTG GCAGTCAACT GCGCGGCCAT TCCCGAAGGG
CTGATCGAGT CCGAGCTGTT CGGCTACCGT GAGGGCGCCT TCACCGGTTC GCGCCGGGGC
GGCATGGTCG GGCGGCTGAT GCAGGCCCAT GGTGGCACGC TGTTCCTCGA CGAAATCGGC
GACATGCCGC TGGCCCTGCA AGCACGCCTG CTGCGGGTGC TGCAGGAGCG CCGCGTAGCA
CCCTTGGGGG CGGGCGACGA GCAGGACATC GACGTGGCGC TGATCTGCGC CACCCACCGC
GACCTCAAGC GCCTGGTGCA GGAGCAGCAC TTCCGTGAAG ACCTGTTCTA CCGGGTCAAC
GGCGTGTCGC TGCGCCTGCC GGCCCTGCGC GAACGCGACG ACCTGGCGGC GATCATCCAA
GGCCTGCTGG ACAAGGCCGA TGCGCGTGGC GTAACCCTCG ACCCGGCGTT GACCGCGTTG
CTCGAAGGCT TCGACTGGCC AGGCAACATC CGCCAGCTGG AAATGGTGGT GCGCACCGCC
CTCGCCATGC GCGAGGATGG CGAGCAGGTG CTGACACTCG ATCACCTTAC CGACTGCCTG
CTGGACGAAC TCGCCAGCAG CGCAGCGCCC TCCGGCAGCC TCAAGGACAG TGAACTGGAA
CAGATTCGCG GTGCTCTGGC GCGCCACCAG GGCAACGTCT CGGCCGCCGC CGCGGCACTG
GGTATCAGCC GGGCGACGCT GTACCGCAAG CTCAAGCAGT TGCGCGGCTG A
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| Protein sequence | MARQLITNAH DPLHESREAR LKLVSEGELP LGMLRDEIDA SWRRSLGHGL DCLQGEQVGL
GLEQGHDLRL LLARNRLLID AVTPELDYLV ARQGKAGIVI LGDAQANVLA IEGQKHVLQR
EGLRDLHPGS CWSESLRGTN AIGTAVVEGR PTLINCGEHY LDRLSPFSCT SVPLRDPRGE
VIGVLDITRE GVMAQPQDSL STLMLAAGNI ESRLFGLCHP DQLVLAFHSR PQYLNSAWHG
LLALSLDGEV LAANDSACQL LQVPRHELIG RRSTDLLGER SPAFIARLWQ GGVSSVQTAK
GEFYFRALQL PRHGRVTPST PSSKPALSKQ SPALDALAGG DQRLARNLRM ARQGLGNGLP
VLLLGETGTG KEVVARALHQ ASPRADKPFV AVNCAAIPEG LIESELFGYR EGAFTGSRRG
GMVGRLMQAH GGTLFLDEIG DMPLALQARL LRVLQERRVA PLGAGDEQDI DVALICATHR
DLKRLVQEQH FREDLFYRVN GVSLRLPALR ERDDLAAIIQ GLLDKADARG VTLDPALTAL
LEGFDWPGNI RQLEMVVRTA LAMREDGEQV LTLDHLTDCL LDELASSAAP SGSLKDSELE
QIRGALARHQ GNVSAAAAAL GISRATLYRK LKQLRG
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