Gene Pput_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2299 
Symbol 
ID5195081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2615274 
End bp2616125 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID640586756 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001267622 
Protein GI148547520 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.85963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TGCTGAGCGC GCTGCTGATC CTCACCGCCC TGGGCCTGCA AAGTGGTTGC 
AGCCTGCGCG AACCCATGTC GGCCGAACAG GACTCGGAAA CCCCGACCCT GACCCCTCGG
GCCTCGACCT ACTACGACCT GATCAACATG CCACGGCCCA AAGGCCGGCT GATGGCCGTG
GTGTACGGCT TCCGCGACCA GACCGGGCAG TACAAGCCGA CCCCGGCCAG CTCGTTTTCC
ACCAGCGTCA CCCAAGGCGC GGCCAGCATG TTGATGGACG CCTTGAGTGC CAGCGGCTGG
TTCGTGGTGC TGGAGCGTGA AGGGCTGCAG AACCTGCTGA CCGAGCGCAA GATCATCCGC
GCGTCGCAGA AAAAGCCGGA TGTCGCGGAA AACATCATGG GCGAACTGCC CCCGCTGCAG
GCCGCCAACC TGATGCTGGA GGGCGGCATC ATTGCCTACG ACACCAACGT GCGCAGCGGC
GGCGAAGGCG CCCGCTACCT AGGCATCGAC ATCTCCCGCG AGTACCGGGT GGACCAGGTC
ACCGTCAACC TGCGCGCTGT GGACGTGCGC ACCGGGCAGG TGCTGGCCAA CGTGATGACC
AGCAAGACCA TCTACTCGGT AGGGCGCAGT GCCGGCGTGT TCAAGTTCAT CGAGTTCAAG
AAGCTGCTGG AAGCCGAGGT GGGGTATACC ACCAATGAAC CGGCGCAGTT GTGCGTGCTG
TCGGCGATTG AATCGGCGGT GGGGCACTTG CTGGCGCAGG GGATCGAGCG GCGGTTGTGG
CAGGTGGCGG GGGATCCAGC TGATGGCAAG GCCACGGTGG ACAAGTTCTT GAGCCAGAAT
CAGCAGCCTT GA
 
Protein sequence
MKRLLSALLI LTALGLQSGC SLREPMSAEQ DSETPTLTPR ASTYYDLINM PRPKGRLMAV 
VYGFRDQTGQ YKPTPASSFS TSVTQGAASM LMDALSASGW FVVLEREGLQ NLLTERKIIR
ASQKKPDVAE NIMGELPPLQ AANLMLEGGI IAYDTNVRSG GEGARYLGID ISREYRVDQV
TVNLRAVDVR TGQVLANVMT SKTIYSVGRS AGVFKFIEFK KLLEAEVGYT TNEPAQLCVL
SAIESAVGHL LAQGIERRLW QVAGDPADGK ATVDKFLSQN QQP