| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2296 |
|---|
| Symbol | |
|---|
| ID | 5195003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2613904 |
|---|
| End bp | 2614431 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640586753 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001267619 |
|---|
| Protein GI | 148547517 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.475849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCT CTTCGCTGAA TGGTAAGGCC AACGGCGGCT TCACCTACCT GGGTGTGCTG
CTGCTGATAG CGGTCAGCAG CGTATCCCTG GCTGCCACCG GCACGATCTG GGCGAGCGCC
GCCCAGCGCG ACCGCGAACG CCAGTTGCTG TGGGTAGGCA GCCAGTACGC CCAGGCCCTG
CGCAGCTACT ACCGCGCATC CCCCGGGCTG GCCCAGTACC CGCAAGACTT GGCCGACCTG
CTGCAGGACA ACCGTTTCCC GCAGGCCAAA CGGCATATCC GCAGGCTTTA CCCTGACCCG
ATCAGCAACA GCGACGAATG GGGCCTGCTG CGCTCGATCG ACGGCCGTAT CACTGGCGTC
TACAGCCGTT CGGACGCCAC CCCTTTCAAG CGCAGTGGCT TCAGCGCCGA ATGGAGCGGG
TTCGAGGGGA TGGAGCACTA CAGCGACTGG CAGTTCGTCG CCGAGCAGGC CTTTACCGAA
AGTGCACGCG GTGTGCAGAC GAATGCAGGC CCGGGAGACA CGCCATGA
|
|---|
| Protein sequence | MAASSLNGKA NGGFTYLGVL LLIAVSSVSL AATGTIWASA AQRDRERQLL WVGSQYAQAL
RSYYRASPGL AQYPQDLADL LQDNRFPQAK RHIRRLYPDP ISNSDEWGLL RSIDGRITGV
YSRSDATPFK RSGFSAEWSG FEGMEHYSDW QFVAEQAFTE SARGVQTNAG PGDTP
|
|---|
| |