| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2285 |
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| Symbol | |
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| ID | 5192859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2603875 |
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| End bp | 2605554 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640586742 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001267608 |
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| Protein GI | 148547506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGCC TGGGGAACTG GCCTCTGTGG CATCACCTGT TGTGGGAGCG GTCTTGCGTC
GCGAAAGGGC TGCGCAGCAG CCCCGGCAGT GGCAGCTTAA GCGCAGAAAG AGGGGCGCGC
TGCGCGCGCC TTTCGCGACG CAAGGCCGCG CCCACAGGGC TTGCGATATG GCTCACATGC
GTGCTTGGCA TGGCATCTTC GACCTCAGCC CTGGCCCTGG ACCTGACCGA CCACGAACAA
GCCGGCAAAC GCCTTTACCG CGAGGGCGTT TCCAGTAGCG ACGCTCAATT GCAAGCCCGG
GTAGGCGCCA GCGGTATCAC AGTCCCCGCC AGCGTGCTGC CCTGCGCCAG TTGCCATGGC
AACGACGGCC GTGGCCGTGC CGAAGGTGGT GTTCGCCCCC CCAGCCTCGA CTGGCAACAC
CTGGCACTCG GTCAGGGCTC GCGCGAGGCC AACGGCCGCC GCTACCCGGC CTACACCGAC
AGCAGCCTGG CGCGGGCCAT CCAGCAGGGT ATCGACCCGG CTGGCAATCG CCTCGACCCG
GCCATGCCAC GCTTCGAGTT GACCTTGGCC GACCAGCGCA ACCTCACCGC CTATCTCAAA
CGCTTGGCCG AAGAACGTGA CCCTGGTGTG GAAGAGGGCG TGCTGCGCCT TGGCACGCTG
CTGCCTGCGA GCGGTCCGCT GGCCGACGCC GGGCAGGTGG TGCGTGCCGT GCTGGAAGAC
GGCGTGGGTC AACTCAATCA GCAAGGCGGC ATTCACGGGC GGCGCCTGGA AATGGTGGTG
CTTGACTCAG GTTCTGACCC AGTCAGTGCC GAACGCGCCT TGCAACAGTT GCTCGAGCAA
AAGCGAGTGT TCGCCCTGAT CGCGCCATTG GCGCCCATGC TCGACCAGCG CCTGACGACC
TTGCTGGCGC CACAGAACGT GCCGATGATC GGCAGTACCC CGCGCAGCGG CGGCAGTGCA
CAGATCTTCG ACCCGCTGCC CGGCTTGCCC GAGCAATTGC TGAGCCTGGC AGGCCATGCC
CGTGTGGCGC TGGGCTTGGC GCCGGATGAG TTACGCGTGG TGTATGCCGG TAACGAACAC
GCCGCGTTAG CCGAGCAGGT GCGCGAGCGT TTACGACAGC AGGGCTGGGC GCCACCCGCT
ATCCAGGCGT TCGACGGCCA GGCGGTGGAC GGGCAGGGCA TCGTCTTCCT TGGCCGCGCC
CAGGCCTTTG CCGAGTTGGC GGCGGCGTTG CAGGTGGCGG GCCGCGAGCC CTACCTGTTC
GCCGCTTCCA GTCAGGTAGC CGGCGCTGTG GCGCGCTTGC CGGCGCAGTG GTCGCAGCGG
CTGTTTCTGG CCTACCCCTA CGTGCCAGAG GACTGGACCG AGCATGGCCA GGCTACGCTC
GCCGGGCTGC AGCAGCGCCA GGGCCTGGAC CCGCGCCAGG TGTCGTTGCA GGTCAATACG
CTGTGCGCGT TGCGCCTGCT GAGCGAAGCG CTGAAGCAGA TTGGACGGGA TGCCAGCCGC
GAGCAACTGA TTGCTGCGCT CGAAGGCTTG CACGATGTGC CCACCGGCCT GACCCCGGCA
CTGGGCTTTG GCCCTGGTCG CCGCCAGGGC ATGGCAGGTG CCCATGTGGT GGCGGTGGCC
CTGCCCGGGC CACGCTTTAC TGCGGTCACC CCCTACCGGC CAGTGCCGGT CAGCCCTTGA
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| Protein sequence | MGRLGNWPLW HHLLWERSCV AKGLRSSPGS GSLSAERGAR CARLSRRKAA PTGLAIWLTC
VLGMASSTSA LALDLTDHEQ AGKRLYREGV SSSDAQLQAR VGASGITVPA SVLPCASCHG
NDGRGRAEGG VRPPSLDWQH LALGQGSREA NGRRYPAYTD SSLARAIQQG IDPAGNRLDP
AMPRFELTLA DQRNLTAYLK RLAEERDPGV EEGVLRLGTL LPASGPLADA GQVVRAVLED
GVGQLNQQGG IHGRRLEMVV LDSGSDPVSA ERALQQLLEQ KRVFALIAPL APMLDQRLTT
LLAPQNVPMI GSTPRSGGSA QIFDPLPGLP EQLLSLAGHA RVALGLAPDE LRVVYAGNEH
AALAEQVRER LRQQGWAPPA IQAFDGQAVD GQGIVFLGRA QAFAELAAAL QVAGREPYLF
AASSQVAGAV ARLPAQWSQR LFLAYPYVPE DWTEHGQATL AGLQQRQGLD PRQVSLQVNT
LCALRLLSEA LKQIGRDASR EQLIAALEGL HDVPTGLTPA LGFGPGRRQG MAGAHVVAVA
LPGPRFTAVT PYRPVPVSP
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