| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2284 |
|---|
| Symbol | |
|---|
| ID | 5192858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2603204 |
|---|
| End bp | 2603869 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640586741 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_001267607 |
|---|
| Protein GI | 148547505 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.882124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG CAACCTCCCA CCGCGCTGGG ATGCGCGCAT TCGACTGGCT GGTACTGGGT
GGCTGCCTGT GGATCCTCAC GTCGGTGGCG TTCGCCCACG AAGGCCATGC GCCGCAACCC
CCCGAGCCGC AGCCAGCACC GCAGGCGATG GCCAGTGGTG GCGGTACACG CGACGCCAAG
ACCTGGTTCA CCGACACCGT GCTGAAGGAC CAGAATGGCC GCGAGCTGCG CTTTTACAGT
GACGTGCTCA AGGACAAGGT GGTGATGCTC AACGTGATCT TCACCCATTG CACCGATGCC
TGCCCGTTGA TCACCCGCAA GCTGCGCGAG GTGCGCGAGG CCATGGGGCC AGCCCTGGCC
GCCCAGGTGA CCTTCGTGTC GATCAGCAGT GACCCGCTGA ACGACACCCC CGAGGCGCTG
AAGGCGTTCG CTGCCAAGCA AGGGGTGGAT GGGCCGAACT GGTTGTTCCT GACCGGTGAC
AAGGCCAATG TCGACCTGGT GCTTGGCCGT ATAGGGCAGT TCCTGCCGAG TCCCGAGCAG
CATTCGACGC AGCTGATTGC CGGTGATGTT GCAGGTAAAC GCTGGAGCAA GATTCGCCCG
GATGCACCGC CAGCGGCGAT TGCCCAGCGC ATGCAGCTGT TGACCCAGCC GCTGGCAGGT
CGGTAA
|
|---|
| Protein sequence | MSTATSHRAG MRAFDWLVLG GCLWILTSVA FAHEGHAPQP PEPQPAPQAM ASGGGTRDAK
TWFTDTVLKD QNGRELRFYS DVLKDKVVML NVIFTHCTDA CPLITRKLRE VREAMGPALA
AQVTFVSISS DPLNDTPEAL KAFAAKQGVD GPNWLFLTGD KANVDLVLGR IGQFLPSPEQ
HSTQLIAGDV AGKRWSKIRP DAPPAAIAQR MQLLTQPLAG R
|
|---|
| |