| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2282 |
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| Symbol | |
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| ID | 5192714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2600578 |
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| End bp | 2602554 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586739 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001267605 |
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| Protein GI | 148547503 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.512242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA AGACTCGCCC TGCTTACTTG GGGGTAGTGC TGGGGGTAGC GCTGATCGGC
CTGGGCGTGG CGTACGAAAA GCTATGGTGC GACCCGCGCG AGCTGTTGCA GGAACGGGGC
GGCTCGCAGG CCTTGCACCG GCTCAGCCGG GACGGCGTGA ACGTGGAGTT CGAGGCCCGG
CCATTGGCCG GCGGCGAACT GAAGGAGGGC GGCTTCGCCA ACATCCGCTT CAAGCTCAGC
GACCAGACCA GTGGCCAACC GCTGTCGGGC ATGGCCCCGG GGGCGTGGAT CGACCCGGCG
CAGTCGGCCC CGGCCGGGGA CCGCGAGCAG AGCTGCAAGG CGCGGGTCGC GCTGTTTCTC
AAGAGCAGCA TCGGGGCCCG GCCGCTGCTC GACCTGAACA GCTACTTCTT GCTGATGTTG
AACAATGACG CCAGCCTGAC AGTGATCGAC CCGACGGTGT CGGTGGGGGG CGTGACCAGC
ACCATGGCCC GCATCGAGCT GCCAGGGCGG CCCATGGACT GGGCGGCCAC CAGCGACGAC
AAGCAGGTTT TCGTGTCGAT ACCCGAGCGG GGCAAGGTCT CGGTGATCGA TACCGAAACC
TTCACCCGCG TGGCCGACCT GGACGCCGGC GACCAGCCGC TTCGCGTGGC CCTGCAGCCG
GACCAGCATC GGCTGTGGGT TGGCAACAAC AGCAGCGACC CGGGCAAAGG CGGGGTAACA
GTGATCGACG TGCCGGGGCG CAGCGCCATG AAGCACTTCA ACACCGGTAC CGGGCACCAC
GAAATCGCCT TCAGCGCCGA CTCGCGCTAT GCCTATGTTA GCAATCGCGA CAGCGGCACC
CTGAGCGTCA TCGACATCCC GGAAATGCGC CTGGCCAAGA CCATCAAGGT AGGCCCGCAC
CCGCTGTCGG TCAGCTATTC GGCGCTGTCC CAGGCTGTGT ACGTGGTCGA TGGCGAGGAG
GGCAGCGTAC GGGTGTTCGA TGCCCGCAGC CATCAGTTGC GCCACACGGT CCAGGCCGAA
CAGGGCCTGG GGCCGATGCG CTTCAGCCAT GATGGCCGCT ACGGCCTCGT GCTCAATACC
CTGGAGAACC AGGCCCTGGT CATCGACGCC AGTACCGACA AGCTGATCCA CCGCATCCCG
GTGGCGGCCG AACCGTACCA GCTGACGTTC ACCAAAGGCT ATGCCTATGT GCGTGGCCTG
GCCTCGCCGA AAGTGAGCAT GATCAATCTG GCCAGCCTGG GCGAGGGGCG TGCGCCCATC
GTGCAAGGCT TCGAGGCTGG CCCGGCAGCG CCGCGCCAGG CCGGCGACCT GCCACTGGCC
CAGGGGCTGT CGGTATCGCG TGATGACAAT TCGGTGTTCG TGGTCAACCC GGTGGACAAC
ACCACCTACT TCTATGCTGA AGGCATGAAT GCCCCGATGT CCGGCTACAA CAACCGCGGC
CACCAGGCCC GCGCCGCCAT CGTCGTTGAC CGCAGCCTGC GCGAAGTGGC CCCCGGGGTG
TATGGCTCGA CGGTGAAGCT GCCCGCCGCC GGCAAGTTCG ACGTTGCCTT CCTGCTCAAC
CAGCCGCAAA TCATTCATTG CTTCAGTACC GAAGTGGCCG CAGGGAGCGA TGCCAGCAAA
CGTAAAGGTG CGCGTGCCGA GTTCATTGGC CTCGACCAGC CGCTGCCGCA GCACAGCGAC
TTCACCGCGC GGGTACGGAT TGTCGGTGAC GACGGGCAGC CGCGCCTGGG CCTGAACGAC
TTGAGCCTGC GCTACTTCCT GGCGCCATCG TCGATGCCGC GCAACCTGCA GCTGCAAGAG
GTGGGCGAGG GCGTCTACCA GGCAGCGCTG AACTTGCCTG AGGCCGGCGC CTGGTACCTG
CATGTGCAGT CGCCCTCGTT GGGGCGCAAG TTTGCCGAAG AAAACTACAC CAGCCTGCGC
GTTCTGCCGG CTGCTGCAAC CAACGCCTCC CAGACTGACG TGAGGAATGT GCGATGA
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| Protein sequence | MNKKTRPAYL GVVLGVALIG LGVAYEKLWC DPRELLQERG GSQALHRLSR DGVNVEFEAR
PLAGGELKEG GFANIRFKLS DQTSGQPLSG MAPGAWIDPA QSAPAGDREQ SCKARVALFL
KSSIGARPLL DLNSYFLLML NNDASLTVID PTVSVGGVTS TMARIELPGR PMDWAATSDD
KQVFVSIPER GKVSVIDTET FTRVADLDAG DQPLRVALQP DQHRLWVGNN SSDPGKGGVT
VIDVPGRSAM KHFNTGTGHH EIAFSADSRY AYVSNRDSGT LSVIDIPEMR LAKTIKVGPH
PLSVSYSALS QAVYVVDGEE GSVRVFDARS HQLRHTVQAE QGLGPMRFSH DGRYGLVLNT
LENQALVIDA STDKLIHRIP VAAEPYQLTF TKGYAYVRGL ASPKVSMINL ASLGEGRAPI
VQGFEAGPAA PRQAGDLPLA QGLSVSRDDN SVFVVNPVDN TTYFYAEGMN APMSGYNNRG
HQARAAIVVD RSLREVAPGV YGSTVKLPAA GKFDVAFLLN QPQIIHCFST EVAAGSDASK
RKGARAEFIG LDQPLPQHSD FTARVRIVGD DGQPRLGLND LSLRYFLAPS SMPRNLQLQE
VGEGVYQAAL NLPEAGAWYL HVQSPSLGRK FAEENYTSLR VLPAAATNAS QTDVRNVR
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