Gene Pput_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2280 
Symbol 
ID5192992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2593320 
End bp2594393 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content66% 
IMG OID640586737 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001267603 
Protein GI148547501 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC ACGCTCATAC CCCGGCAGCA ACCGACCATG TACTGGCCGA GGTCCGTAAC 
CAGATCGGCC ACCTGACCCT GAACCGCCCA GCCGGTCTCA ATGCCCTGAC CCTGGACATG
GTGCGCAGCC TGCGTCAGCA CCTGGACCAG TGGGCCGACA ACCCGCAGGT ACGCGCCGTG
GTCCTGCGCG GCGAAGGCCC CAAGGGGTTC TGTGCCGGTG GCGATATCCG CTCGCTGTAC
GACAGCTTCA AGGCCGGCGA CACGCTGCAT GAAACCTTTT TCGTCGAAGA GTACGCCCTC
GACCTGGTCA TCCACCGCTA CCGCAAGCCA ATACTGGTGG TGATGGACGG CTTCACCCTC
GGGGGCGGCA TGGGCCTGGC CCAGGGCTGC GACCTGCGCG TGGTCACCGA GCGCAGCCGG
CTGGGCATGC CCGAGGTCGG CATCGGCTAC TTCCCGGACG TGGGCGGCAG CTACTTCCTC
TCGCGCATCC CCGGCGAGCT GGGCATCTAC CTGGGTGTCA GCGGTGCCCA GATCCAGGCG
GCCGACGCCT TGTATTGCGG CCTGGCCGAC TGGTACCTGG CCAGCGATCA GCTCGCTGCC
CTCGACCGGG GCCTCGACCA GCTCGACTTC AGCGATCACC CGCTCAAGGA CCTGCAAAAC
CTGCTGGCCA GGCTCGGCAC CCAGACACTG GATGATGCGC CACTGGAAAA GCTGCGCCCG
GCCATCGACC ACTTCTTCGC CCTGCCCGAC CTGCCAGCTA TCGTCGAGCA ACTGCGTGCG
GTGAGCCTCG GCGACAGCCA CGCCTGGGCG GTGGCCACCG CCGATCAGCT GGAAACCCGC
TCGCCTCTGG CCATGGCGGT TACGCTGGAG ATGCTGCGCC GGGGGCGCGA GCTGGGCATT
GACGACTGCT TTGCCATGGA ACTGCACCTG GACCGCCAGT GGTTCCAGCA CGGCGACATC
ATCGAAGGCG TGCGTGCCCT GATCATCGAC AAGGACAAGC AGCCCCGCTG GAACCCGCCG
ACCCTGGCCG CGCTGCAAGG CCAGCGGGTC GAACAATTCT TCGAAGGCTT GTGA
 
Protein sequence
MTAHAHTPAA TDHVLAEVRN QIGHLTLNRP AGLNALTLDM VRSLRQHLDQ WADNPQVRAV 
VLRGEGPKGF CAGGDIRSLY DSFKAGDTLH ETFFVEEYAL DLVIHRYRKP ILVVMDGFTL
GGGMGLAQGC DLRVVTERSR LGMPEVGIGY FPDVGGSYFL SRIPGELGIY LGVSGAQIQA
ADALYCGLAD WYLASDQLAA LDRGLDQLDF SDHPLKDLQN LLARLGTQTL DDAPLEKLRP
AIDHFFALPD LPAIVEQLRA VSLGDSHAWA VATADQLETR SPLAMAVTLE MLRRGRELGI
DDCFAMELHL DRQWFQHGDI IEGVRALIID KDKQPRWNPP TLAALQGQRV EQFFEGL