| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2278 |
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| Symbol | |
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| ID | 5192925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2591118 |
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| End bp | 2592050 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586735 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267601 |
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| Protein GI | 148547499 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC TGCATGCCAT GCGTACCTTC ACCCGTGTGG TGGAATGTGG CAGCTTCGCT
GCAGCTGCCA ATGCTCTGGA TATTTCTGCA GCGCAGGTTT CGCGCATCGT TGCCGAGCTG
GAGAACCAGC TGCAGACCCG CCTGCTGCAC CGCACCACCC GGCGCTTGCG CATGAGCGAG
GCGGGTGAGC GGTTTCTGGA GCGTGCTCGG CAGATCATGC TGCTGACCGA AGAAGCCGTG
GGCGAAGCGC GAGGGGCGCA CCTCACGCCT CGCGGCCATC TGCGTTTGCA CTGCCCGCAC
GGCATGGGGC TGTTGCTGAT GCCGCTGGTG GCCGGCTACA ACACGCTATA CCCGGAAGTG
GTGATCGAGC TGACGCTGTC GCAGCGCAAC CCCGACCCGC TGGCAGAAGG GCATGACGTG
GTGATCACCG TGGACGGTGC GCTGCCGGAT TCGCAGCTGA TCGCTGTGCC GCTGGGCAAC
ATTTTCAGCA TCCCCTGCGC GGCCCCCGGT TACCTGGATA CCCACGGTGT ACCGGAGCGC
CCCGAAGACT TGCACGGCCA TCGCTGCCTG CGCATGGCTT ACCCGATGTA CGAAGGCGAC
TGGGTGTTCC CGCAAGGGGT TGACCAGTGC GTGATTGCGC CGAATGACAG TTTTTCCACC
AACGTTGCCG ACGCCATGCT GGTGGCCAGC GAGCTGGGCA TGGGCATTGG CCTGCTGCCG
TTCTACACCG CCAGCGAGGC GATCGAGCAG GGGCGCTTGC GCCGGTTGTT GGCACCGTAT
CGGTTGAGGG AGAGTGCGCT GTATGCGATG TATCCGTCAC GCCACTACCT GGATGCCAAG
GTGCGCACCT GGATCGACTA CCTCAAGGAG CAGTTGCCGG CGCTGTTCGA GGGGCATGCC
AGGGTGGTGG ATGACGCGCG GTATTGGCGC TGA
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| Protein sequence | MDMLHAMRTF TRVVECGSFA AAANALDISA AQVSRIVAEL ENQLQTRLLH RTTRRLRMSE
AGERFLERAR QIMLLTEEAV GEARGAHLTP RGHLRLHCPH GMGLLLMPLV AGYNTLYPEV
VIELTLSQRN PDPLAEGHDV VITVDGALPD SQLIAVPLGN IFSIPCAAPG YLDTHGVPER
PEDLHGHRCL RMAYPMYEGD WVFPQGVDQC VIAPNDSFST NVADAMLVAS ELGMGIGLLP
FYTASEAIEQ GRLRRLLAPY RLRESALYAM YPSRHYLDAK VRTWIDYLKE QLPALFEGHA
RVVDDARYWR
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