Gene Pput_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2253 
Symbol 
ID5190225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2561821 
End bp2562855 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID640586710 
Producthypothetical protein 
Protein accessionYP_001267576 
Protein GI148547474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACT CTGACAAAAC TACGCACTTT TTCTTGCAAC AGGGTAAAGT TCATACAGCT 
TTATCGGGTA CATCAGCCAT GGTGTGCGTT AGAGCGCAAC CAGAGATATT AGCCGAAACG
CGGCTAGAGC AAGAATCTAC ACGCACGGCG TTATTGGCTA CAGACGGAGT GCAGACCGTG
GTCGTGGTCA AGTCTCAGGC GCAGGGGGAG TCGGTTGCCT ACAATGCTTA TGGCTATCAC
ACCCCCCATG ACATTCCTCC GCACCGGCCA GCATTCAATG GTCACTTGCT GGTGAACAGC
CAGTATTTAC TCGGTAATGG CTATCGCAGC TATAACCCTG CCTTGATGCG TTTTCACAGT
CCGGACAGTT TCAGCCCCTT TGGCGCAGGT GGATTGAACT GTTACGCCTA CTGTATGGAC
GACCCGGTCA ACTTCAGTGA CCCCGATGGG CATTCACCAA GATTGAGGTC AAACAGCCTG
CCCGGGCTCA AGTCAGAGGC GAAGATGAAT CGCATTGTGT CGGGGAGGGT TGAAAAAAGG
CCAAGACGTA GTAGCGAAGG CTATTACATG TCGTCATCGC TCATGGATGA AACAGTGCAA
GACATATTGA ATGGGCAGCC GGGTTGGAAC ACCTCAGGCG CACCCGTACA AGGCAGCCTG
CAGCGTGGTC AGGCATCAAG CTCTGGTCAG GTAAAGTCAT CCTCGATGGC TGGTATGAGA
GCAGGAAAAG GCACGGTGGC TTCGGACTCC TGGATCTATA AGCGCCAGGA GCTTAATAAT
ACCGATATTG AAGAACTTAG GAACTTCAAT GCTAAGAGTA GGCATGTTTT TTTGGGTTTG
GATCTAGAGA AATCACATGA GCTGCGAGTA ATTGCGATCG ATGCTCTTGC TGCTGGGATT
AATGTGCGGG GAGCGCTTAG GGATAGTAAA CTTCAGCCGG CGCATTCAAC GGCTGACAGG
GTTGCAGATA ATATTTCACG TGCACTCCGC AGAATTCGTG ATAAGAGGGG GACAACCAGT
TGGCGTTCTG ATTGA
 
Protein sequence
MVDSDKTTHF FLQQGKVHTA LSGTSAMVCV RAQPEILAET RLEQESTRTA LLATDGVQTV 
VVVKSQAQGE SVAYNAYGYH TPHDIPPHRP AFNGHLLVNS QYLLGNGYRS YNPALMRFHS
PDSFSPFGAG GLNCYAYCMD DPVNFSDPDG HSPRLRSNSL PGLKSEAKMN RIVSGRVEKR
PRRSSEGYYM SSSLMDETVQ DILNGQPGWN TSGAPVQGSL QRGQASSSGQ VKSSSMAGMR
AGKGTVASDS WIYKRQELNN TDIEELRNFN AKSRHVFLGL DLEKSHELRV IAIDALAAGI
NVRGALRDSK LQPAHSTADR VADNISRALR RIRDKRGTTS WRSD