Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2247 |
Symbol | |
ID | 5194186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2557699 |
End bp | 2558382 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640586704 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001267570 |
Protein GI | 148547468 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATT CCGTAGTCGG CCTCGGCCAG CCTGAAACCG AAGGGGTGCG CAAAACGCGC AAGAACAACC CTGAGAAAAC ACGCGAGGAC ATCCTCCAGG CCGCCATCAA CGAGTTCGTT CAGCAAGGGC TGGCCGGCGC CCGCGTCGAC GCCATCGCCG AACGCACCGC CACTTCCAAG CGCATGATCT ACTACTACTT CGGCAGCAAG GAGCAGCTGT ATTGCGAGTG CCTGGTGAAG TTGTACGGGG ATATCCGCAA GACCGAACAG AGCCTGGACC TGGAGTCGTT ACCGGCTGAG CAGGCGATCC GCCGGCTGGT GGAGTTCACC TTCGATCACC ATGACCGCAA CGTCGATTTC GTGCGCATCA TCTGCACCGA AAACATCCAC TATGGCGAGT ACGTCAAGCA GTCGCCGGCC ATTCGCGAAA TGAGCAGCCT GGTGCTGGAG GCCCTGGGCA ACACCCTGCG CCGTGGCGTT CAGGAAGGCG TGTTCCGCGC CGGCATCGAG GTCATCGACC TGCACATGCT GATGAGCTCG TTCTGCTTCT ACCGGGTGTC GAACCGCCAT ACCTTTGGCG AGATCTTCCA GATCGACCTG TCTGATGAGC AAATAAAGCT GCGCCACAAA GCCATGATCT GTGATGCGGT GTTGCGGTAT ATCCAGCTCG AGCCTCGTAC CTGA
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Protein sequence | MSDSVVGLGQ PETEGVRKTR KNNPEKTRED ILQAAINEFV QQGLAGARVD AIAERTATSK RMIYYYFGSK EQLYCECLVK LYGDIRKTEQ SLDLESLPAE QAIRRLVEFT FDHHDRNVDF VRIICTENIH YGEYVKQSPA IREMSSLVLE ALGNTLRRGV QEGVFRAGIE VIDLHMLMSS FCFYRVSNRH TFGEIFQIDL SDEQIKLRHK AMICDAVLRY IQLEPRT
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