Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2246 |
Symbol | |
ID | 5194185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2556666 |
End bp | 2557550 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586703 |
Product | hypothetical protein |
Protein accession | YP_001267569 |
Protein GI | 148547467 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCACA TCCTGCGCAA GCGCAGCGCC CGCATCGCCT TGACTGCCAC CTCCGGCGTG CTCGCGGCCA CCTTGGGCTT CTTCGCGTGG CAAAGTTTCT ACCCGGTTCA GGCCGCTACC GGCTGGGATG TTGAGGTGTT GCATCGCGAC GTAACCAAAG CCGCCTCGCT GTTACCGCAA ACGGATGGCA GCCTGCTGGT CAGCCGTGAA CTGGATGACG GCCGGGGCAG CATCCTCAAG ATCACGGCTA CGGGCGAGCG CGTCGTGCTG ATCGATAACC TGTCCAAGCC CGACGGTATG GTCGCGGCGC AGGGCGGCTG GGTGTTCAGC CAGGAAGGTG GCCTGGCACC TGTCAGCCTG TCCCGCGATG GCCAGGTCAC CCAGCTGTTC GACGGCGAGA GCGTGCAAGG CCTCTGGAAC GAAGGCAACT ATCTTTATGC CATCGAAGAC CGCAAGGGCA ATGGTCGCCT GATGCGCTAT GACTGGAGCA GCGGGCAGCT GGATGTACTG CGGTCCGGCC TGACCGAAAC CGAAGGCCTG ACCCGCTGCA GCGACGGCCG CCTGCTGTAC ACCGAAAAGG CCAATGGCAG GGTCCGCTCC CTGTCCGACG ATGGCAGCGA CCCGGTGGTG GTCGACGGTC TGCGTAACCC TACATTCTTG TATTGTGATC AACGTGGCTT ATGGATCAGC GAGGACAACA CACACCGTGC GCGCCTGCTG CGCATCGATG CCGATGGCAG CCAGCAAACG GTGCTGACTT TCCTCAAGGC TCCGCAGGCG ATCATCGCCG ATGGTATCGG GGGTTATCTG CTCGCTGAAG GTGGGCGTAA CCGCGTGCTG CGCCTGACGC CCGCGCCGGC GCCCGCGACT GCCCAGCGTA ACTGA
|
Protein sequence | MPHILRKRSA RIALTATSGV LAATLGFFAW QSFYPVQAAT GWDVEVLHRD VTKAASLLPQ TDGSLLVSRE LDDGRGSILK ITATGERVVL IDNLSKPDGM VAAQGGWVFS QEGGLAPVSL SRDGQVTQLF DGESVQGLWN EGNYLYAIED RKGNGRLMRY DWSSGQLDVL RSGLTETEGL TRCSDGRLLY TEKANGRVRS LSDDGSDPVV VDGLRNPTFL YCDQRGLWIS EDNTHRARLL RIDADGSQQT VLTFLKAPQA IIADGIGGYL LAEGGRNRVL RLTPAPAPAT AQRN
|
| |