| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2245 |
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| Symbol | |
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| ID | 5192906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2555425 |
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| End bp | 2556405 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586702 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001267568 |
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| Protein GI | 148547466 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC ATGCCTTCTC CCCATTACGC CGTCTGCTGA TCGGCGGTTT ACTGGCCAGC
GTCGCCAGCG CCCTGCTGCC CTGGTCCGAA GCCATTGCCG ACGACGCCAG GACACTGCGC
ATCGGCTACC AGAAATTCAA CAGCATCAAC ATCCTCAAAG GCAGCGGCGC CCTGGAAAAG
GCCCTGGCAC CGCAAGGTGT GAAGGTCAGC TGGCATGAGT TCGCCGCAGG CCCCCAGCTA
CTGGAGGCAC TGAGCACCGG CGCCATCGAC CTCGGCCACG CAGCCGATGC CCCCTCGGTG
TTCGCCCAGG CCGCCGGCAA GCCTGTGGTC TACCTGGCCG CCGAACAACC CTACCCACGC
GGCATTGGCC TGGTCGTGCG CGAGCAGGAC CACCTGGCCA GTGTGCAGGA CCTGAAAGGC
AAGCGCGTGG CCACCGGCCG CGGCTGGAAT GCCCAGTACC TGCTGGCCGT AGCCCTGCAG
CAGGCTGGGC TCAGTTACAA GGACATTACC CCCGCCTACG TCAACAATGC CGCCGATGCC
GTGGCCGCCT TGCAATCGGG CAGCGTGCAG GCCGTGACCC TTTGGGACCC ATTCCTCGCC
GCCGCAGAAA GCCAGCCAGG GCTGAAGAAC CTGCGCGATG GCAGCGGCCT GTCCAACAAC
CGCACCTTCT ACCTGTCCAC CGCCAGCTAT GCCGACCAGC ACCGTGCACT GCTGAAAACC
TTCTTTGCCG AGCTGGGCAA GGTCAGCCAG TGGGCCAACG CCAAGCCTGC CGAAGTGGCC
GCGCTGCTGG CACCGCAGTT GGGGATCAGC ACCCAGGTGC TGGAAGTGGC CAGCGAACGG
CGCAACTACA ACGCCGTCGC TATCACCCCG CAGATCGTTG CCGAACAACA GAAGCTGGCT
GACACCTTCC AGGGCCTGGG CCTGATTCCA CGCAAGCTAC AGGTGGCCGA AGCGGTCTAC
CCGGCTTCCG TGTTGCCTTG A
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| Protein sequence | MPKHAFSPLR RLLIGGLLAS VASALLPWSE AIADDARTLR IGYQKFNSIN ILKGSGALEK
ALAPQGVKVS WHEFAAGPQL LEALSTGAID LGHAADAPSV FAQAAGKPVV YLAAEQPYPR
GIGLVVREQD HLASVQDLKG KRVATGRGWN AQYLLAVALQ QAGLSYKDIT PAYVNNAADA
VAALQSGSVQ AVTLWDPFLA AAESQPGLKN LRDGSGLSNN RTFYLSTASY ADQHRALLKT
FFAELGKVSQ WANAKPAEVA ALLAPQLGIS TQVLEVASER RNYNAVAITP QIVAEQQKLA
DTFQGLGLIP RKLQVAEAVY PASVLP
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