Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2239 |
Symbol | |
ID | 5191713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2549614 |
End bp | 2550495 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586696 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001267562 |
Protein GI | 148547460 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATCA GCGTGAAATC GAATAGGGCT CTGTTCGACC TCGACCTGCT GCGCGCCATT GTCGTGGTGG CCGACTGCGG CAGCTTCACC ACCGCTGCCG CGCGGCTGCA TTCGACCCAG TCGACGATCA GCCAGAAAGT GCGCCGCCTG GAAGACATGG TTGGCCACCG CCTGCTGGTG CGAGGCAACC GTGATGTGCT GCCGACCGAC GCCGGGCAGA CCTTGCTCGG CTATGCCCGG CACATGCTGG CCCTGAACGA TCAGATGCTT GAAGCCCTGG CCGGGGCGAT GGTGGGCACC ACGGTACGGC TTGGTGTGCC CGAGGACTTC GTGGGCGGGC GTACCACCAA TGCGCTGTCG GCATTCAGCC GGCTGCACCC ACAGGTGAAG CTCGAAGTGA CCAGCGGCTT GTGCCGTGAC CTGAGCCAGG CCTATGACAA TGGCGAACTT GACCTGGTGC TGCTCAAGCA GCGGCGCAAC AGCCGTGAGG GCGTGGCCTG TTGGCCAGAG CGCCTGCAGT GGATCGACAG TGCGCGCACG CCCGCCTTCG AGCTGGACCC GATCCCGTTG GTCACCTTTC CGCCACGCGG CCTGTACCGC GAGGACATGA TCAACGCCAT CGAAGGCATG GGGCGGCGCT GGCGCATCAG CTTTACCAGT TCCAGCCTCA GTGGCATCCA GGCTGCGGTC GCCGATGGCA TGGGTATCAG CCTGCTGCCA CCCAGGGCGG CCACCGGCGA GCACAGGGTG CTGGGGGCCG GGCAAGGGCT GCCGGAGGTC GACAGCTATG AGATCGTCAT CGTGCACCGG CCGACAGCGG ATGTGATGGT CAAGGCGTTG GCTGAGGTGA TGACGCAGTT GCTGGCGGGC GGTGGGATCT GA
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Protein sequence | MSISVKSNRA LFDLDLLRAI VVVADCGSFT TAAARLHSTQ STISQKVRRL EDMVGHRLLV RGNRDVLPTD AGQTLLGYAR HMLALNDQML EALAGAMVGT TVRLGVPEDF VGGRTTNALS AFSRLHPQVK LEVTSGLCRD LSQAYDNGEL DLVLLKQRRN SREGVACWPE RLQWIDSART PAFELDPIPL VTFPPRGLYR EDMINAIEGM GRRWRISFTS SSLSGIQAAV ADGMGISLLP PRAATGEHRV LGAGQGLPEV DSYEIVIVHR PTADVMVKAL AEVMTQLLAG GGI
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