| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2236 |
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| Symbol | |
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| ID | 5192275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2545391 |
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| End bp | 2546269 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586693 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001267559 |
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| Protein GI | 148547457 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA CCCTCCCCGG CGTCCCGTTG TTCAAGCTGT ATGGCGAAAA TCAGGCCTGG
CCCGGCACCG ACCTGCTGCA CTGCGAGTCG ATCCCGGCAC GCAGCCGCCT GCATCACTGG
GAGATCAAGC CGCACCAGCA TGCCGAGCTG TTCCAGCTGC TGTATGTACA GCGTGGCCAG
GCCCAGGTGG AGATCGAGGG CGTGCGCAGT GCCATCGGCG AAGCGGCGAT CCAGGTCGTG
CCACCGATGA CCGTGCATGG CTTTCGCTTC AGCGCTGATA TCCAGGGCTA TGTCCTGACC
TTTGGTACTG CCCTTGTAGC GAACCTGGAA CAGCGCCTGG GCGCGCCACT GACGGTGCTG
GCACAACCTG CGTGTTATCC GTTGGGCCAT GACCGCGTGC ACCTGCGCAG CCTGGTCGAC
ACCTTGCAGC GGGAGTACCA AGGCAATGCC CCGGCACGCG CCGCGATGCT GGAAGCGTTG
GTGACCGCGC TGATGGTGTG GATCAGCCGC CGTCAGCAGC AAGGGCAGGC ACCGCGTAAC
CGTGATGAGC GTGACCGCCT GTTGCTGGGG CAATACTTGC GCTTGGTCGA AGCGCATTAC
CGCGAGCATC TGTCGGTTGA AGACTTTGCC GCGCGGCTGA ATATTCCGAG TTTGCAACTG
AACCAGCTGT GCCGGGCACT GAGCGGTCAG ACTGCATTGC AGGTGGTGCA CCAGCGGTTG
TTGCTGGAGG CGCGACGCAA CCTTATTTAC ACGCGGATGA GCATTGGGCA GTTGTCGGAT
AGCCTGGGGT TTACCGACCC GACCTACTTC GCCCGGTGGT TCAAGCGCTT GAGTGGGCAA
ACGCCCAATG CGTATCGCAG ATCAGGGTTG TCGGAATAA
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| Protein sequence | MKSTLPGVPL FKLYGENQAW PGTDLLHCES IPARSRLHHW EIKPHQHAEL FQLLYVQRGQ
AQVEIEGVRS AIGEAAIQVV PPMTVHGFRF SADIQGYVLT FGTALVANLE QRLGAPLTVL
AQPACYPLGH DRVHLRSLVD TLQREYQGNA PARAAMLEAL VTALMVWISR RQQQGQAPRN
RDERDRLLLG QYLRLVEAHY REHLSVEDFA ARLNIPSLQL NQLCRALSGQ TALQVVHQRL
LLEARRNLIY TRMSIGQLSD SLGFTDPTYF ARWFKRLSGQ TPNAYRRSGL SE
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