Gene Pput_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2233 
Symbol 
ID5192015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2542947 
End bp2543465 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content63% 
IMG OID640586690 
ProductMgtC/SapB transporter 
Protein accessionYP_001267556 
Protein GI148547454 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA TCTGGCAAGC AATCCAGGCG GAATTCGCCG ATGTCACCGA TGAGCGCGAG 
GTCACGCAAA TCCTTGTGCG CTTGCTGATG GCTGCTGTGC TCGGCGCAGT ACTGGGCTTC
GAGCGCGAAC ACAAGGGCAA GTCTGCCGGG GTGCGTACCC ACATGCTGGT GTCGCTGGGG
GCCGCCCTGT TCGTGCTGGC GCCCAGTATG GCGGGGGCCG ATGAACAGGC ACTCAGTCGG
GTGATCCAGG GCATCGTTGC CGGTATCGGT TTTCTCGGTG CGGGTACCAT TCTGAAGGGT
AACGGCCAGG ACACCAGCCA TGTGAAGGGC CTGACGACCG CTGCCGGGCT ATGGATGACG
GCTGCCATTG GCACGGCGGC TGGCATGGGG CGCGAAGCCA CGGCGCTGAT CAGCACGGTA
CTGGCCCTGC TGGTACTGGG CACGATGCCG TTGCTGGTGG AGAAGGTCGA AGGACAGAAT
GAGGAGAAGC AGAAGGAGGA AGAGGGCAGG AAGCACTGA
 
Protein sequence
MDVIWQAIQA EFADVTDERE VTQILVRLLM AAVLGAVLGF EREHKGKSAG VRTHMLVSLG 
AALFVLAPSM AGADEQALSR VIQGIVAGIG FLGAGTILKG NGQDTSHVKG LTTAAGLWMT
AAIGTAAGMG REATALISTV LALLVLGTMP LLVEKVEGQN EEKQKEEEGR KH