| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2231 |
|---|
| Symbol | |
|---|
| ID | 5195032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2541013 |
|---|
| End bp | 2542416 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640586688 |
|---|
| Product | cytochrome c oxidase cbb3 type, accessory protein FixG |
|---|
| Protein accession | YP_001267554 |
|---|
| Protein GI | 148547452 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA GAATCCCTTT TACAGAGATC GCCACCGCCC CAGCCAGCAT CCAAGCGCGA
CGCACCGACA GCGGCATCCA GACCCGCAGC TTTACCGGGC TTTACCGTAA CCTGCGCATC
GGCTTTGCCG GCGCCCTGTT CGTGCTGTTC TTCGGCACGG CCTGGCTGAA CTGGAACGGC
CGCCAGGCCG TACTGTGGGA CCTGGGAAAC AGCAAGTTCC ACATCTTCGG CGCCACCTTC
TGGCCACAGG ACTTCATCCT GCTGTCGGCG CTGCTGATCA TCTGTGCCTT TGGCCTGTTC
GCCATCACCG TCTACGCCGG GCGCGTCTGG TGCGGTTACA GTTGCCCACA AAGCACCTGG
ACCTGGCTAT TCATGTGGTG CGAAAAGGTT ACCGAGGGGG ACCGCAACCA GCGCATCAAG
CTGGCCGCGG CGCCCTGGAG CCTGAACAAA CTGGCCCGTC GCACGCTCAA ACACAGCCTG
TGGTTGGCCA TTGGCGTGCT CACGGGGCTG ACCTTCGTCG GCTACTTCAC CCCGATCCGG
CCACTGGCCG CAGAATTGCT CACCTTGCAA CTGGGCGGTG TGGCACTGTT CTGGGTGCTG
TTCTTCACGG CCGCTACCTA CATCAATGCC GGCCTGCTGC GTGAAGCGGT GTGCCTGCAC
ATGTGCCCGT ATGCGCGCTT CCAGAGCGTG ATGTTCGACA AGGACACCCT GGCGGTCGCT
TACGACCCGC GTCGTGGCGA GGCCCGTGGT CCGCGCAAGA AAGGCAGTGA TGTCGGTGCC
CAGGGACTGG GTGACTGCAT CGATTGCACC CTGTGCGTGC AGGTGTGCCC CACCGGCATC
GACATCCGTG ATGGCTTGCA GATGGCTTGC ATCGGCTGTG CCGCGTGCAT CGACGCCTGT
GATGGGGTAA TGGACAAGAT GGGTTATGCC CGCGGCCTGA TTGGCTACAA GTCCGAACAC
AGCCTGCAAG GCGGTACCAC GCACTGGCTG CGCCCGCGCC TGTTGGGCTA CGCTGCCGCA
CTGCTGGTCA TGATCGGGGC ACTGGTGGTG GCCCTGCAGA TGCGCCCGAT GGTATCGCTG
GATGTGATCA AGGACCGCGG CCTGTTCCGT GAAAACGCCC AAGGCCAGAT CGAGAACATT
TACCTGCTCA AGGTCATCAA CAAGACCGAA CGTACCCAGC ACTATCAATT GCGCCTGCTG
GACGCTGACG GTTTCACCCT GCAGGGCAGT AGCGCACTGG TCATCCCTGC TGGCGAAATG
AGCGAACTGC CGGTGTCGGT GGCGATGCTC GCCGAGCGCC CGACCAGCAG CTCGCAGACG
CTGAGCTTTG AAATCAGCGA GCGTGACGAC CCCGCTATCC GCAGCGTGGC GCACAGTCGC
TTTGTCGCCC CCATGAACCG CTGA
|
|---|
| Protein sequence | MNDRIPFTEI ATAPASIQAR RTDSGIQTRS FTGLYRNLRI GFAGALFVLF FGTAWLNWNG
RQAVLWDLGN SKFHIFGATF WPQDFILLSA LLIICAFGLF AITVYAGRVW CGYSCPQSTW
TWLFMWCEKV TEGDRNQRIK LAAAPWSLNK LARRTLKHSL WLAIGVLTGL TFVGYFTPIR
PLAAELLTLQ LGGVALFWVL FFTAATYINA GLLREAVCLH MCPYARFQSV MFDKDTLAVA
YDPRRGEARG PRKKGSDVGA QGLGDCIDCT LCVQVCPTGI DIRDGLQMAC IGCAACIDAC
DGVMDKMGYA RGLIGYKSEH SLQGGTTHWL RPRLLGYAAA LLVMIGALVV ALQMRPMVSL
DVIKDRGLFR ENAQGQIENI YLLKVINKTE RTQHYQLRLL DADGFTLQGS SALVIPAGEM
SELPVSVAML AERPTSSSQT LSFEISERDD PAIRSVAHSR FVAPMNR
|
|---|
| |