| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2227 |
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| Symbol | |
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| ID | 5191309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2534949 |
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| End bp | 2535695 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586684 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001267550 |
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| Protein GI | 148547448 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.858408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACG TCATTGTCAT CACCGGCGGC AGCCGCGGCA TCGGCGCCGC CACTGCGCTG
CTGGCCGCCC GCCAGGGCTA CCGCATCTGC ATCAACTATC TCGCCGATGA CCAGGCCGCC
GAAGCCATCC TCAGCCAGGT CCGCGCCCTG GGCGCCGAGG CCATCGCGGT GCGCGCCGAC
GTTAGCGTCG AAGATGAAAT CATCCAGCTG TTCCTGCGCG TCGACGATGA GCTCGGCCCG
ATCACCGCAC TGGTCAACAA CGCCGGCACC ATCGGCCAGC AAAGCAGGGT CGAGGACATG
TCCGAGTTCC GTCTGCTGAA CGTCATGAAG ACCAACGTCG TCGGCCCCAT GCTCTGCGCC
AAGCACGCCC TGCTGCGCAT GGCGCGCCGG CATGGCGGGC AAGGCGGGGC CATCGTCAAC
GTATCATCGG TCGCCGCACG CCTGGGTTCG CCCAACGAGT ATGTCGACTA TGCCGCCTCC
AAGGGCGCGC TCGACACCTT CACCATCGGC CTGGCCAAAG AAGTGGCAGG CGAGGGCGTA
CGCGTCAATG GCGTACGACC AGGCTATATC CATACCGGTT TCCATGCGCT TTCGGGTGAC
CCGGATCGCG TCAGCAAGCT TGAACCTGGC TTGCCCATGG GCCGAGGAGG GCATCCCGAG
GAAGTGGCCG AGGCCATCCT CTGGTTGCTT TCGGACAAAG CCTCCTATGC CACCGGCAGT
TTCATCGACC TGGGCGGCGG GCGCTGA
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| Protein sequence | MENVIVITGG SRGIGAATAL LAARQGYRIC INYLADDQAA EAILSQVRAL GAEAIAVRAD
VSVEDEIIQL FLRVDDELGP ITALVNNAGT IGQQSRVEDM SEFRLLNVMK TNVVGPMLCA
KHALLRMARR HGGQGGAIVN VSSVAARLGS PNEYVDYAAS KGALDTFTIG LAKEVAGEGV
RVNGVRPGYI HTGFHALSGD PDRVSKLEPG LPMGRGGHPE EVAEAILWLL SDKASYATGS
FIDLGGGR
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