| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2226 |
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| Symbol | |
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| ID | 5191308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2532485 |
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| End bp | 2534020 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586683 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001267549 |
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| Protein GI | 148547447 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ACGCCGCTGC CCAGTTCACG CCGCCAAGTC TGCTGCTGAC CACCATCGGC
CTATCGCTCG CGACGTTCAT GCAGGTGCTG GACACCACCA TCGCCAACGT GGCCCTGCCG
ACCATTTCCG GCAACCTGGG GGTGAGCTAC GAGCAAGGCA CCTGGGTCAT CACCTCGTTC
GCGGTGAGCA ACGCTATCGC CTTGCCGCTG ACCGGCTGGC TGAGCCGGCG CTTTGGTGAA
GTGAAACTGT TCATCTGGGC CACGCTGCTG TTCGTGCTGG CTTCGTTCCT GTGCGGTATT
GCCCAGTCGA TGCCCGAGCT GGTCGGGTTT CGCGTCTTGC AGGGTGTGGT CGCCGGGCCG
CTTTACCCGA TGACGCAGAC CCTGCTGATT GCTGTCTATC CCCCGGCAAA ACGGGGGATG
GCACTGGCGC TGCTGGCGAT GGTCACGGTG GTGGCGCCGA TTGCCGGGCC GATTCTTGGG
GGCTGGATTA CCGATAGCTA CAGCTGGCCA TGGATCTTCT TCATCAACGT GCCCATCGGC
CTGTTCGCTG CTGCCGTGGT GCGCCAGCAG ATGCGTACGC GCCCGGTGGT CACCAGCCGC
CAGCCGATGG ATTACATTGG CCTGCTGACC CTCATTATCG GCGTCGGGGC CTTGCAGGTA
GTGCTGGACA AGGGCAACGA TCTGGACTGG TTCGAGTCGT CGTTCATCAT TGTCGGCAGC
CTGGTTTCGT TGGTGTTCCT GGCGGTATTC GTGATCTGGG AACTGACCGA CCGGCACCCG
GTGGTCAACT TGCGTCTGTT TGTGCACCGC AACTTCCGCA TTGGCACCAT TGTGCTGGTC
GGGGGGTATG CCGGGTTCTT CGGTATCAAC CTGATCCTGC CGCAGTGGTT GCAGACGCAG
ATGGGCTATA CCGCGACTTG GGCGGGCCTG GCGGTGGCGC CGATCGGTTT GCTGCCGGTG
ATCATGTCGC CGTTCGTGGG CAAATATGCG CACCGTTTCG ACCTGCGGGT GCTCGCTGGG
TTGGCGTTCC TGGCGATTGG CACCAGTTGC TACATGCGTG CCGGTTTCAC CAGCGAGGTG
GACTTCCAGC ACGTGGCCTT GGTGCAGTTG TTCATGGGGA TTGGCGTGGC GTTGTTCTTC
ATGCCGACCT TGAGCATTCT GCTGTCTGAC CTGCCGCCGC ACCAGATTGC CGACGGTTCG
GGGCTGGCGA CTTTTCTGCG AACCTTGGGC GGGAGTTTTG CGGCTTCGTT GACTACCTGG
ATCTGGATTC GTCGGGCGGA TCAGCACCAT GCCTACCTGA GCGAGCACAT CAGCCAGTTC
GACCCGACGA CGCGGCATAC CCTTGAGCAG TTGGGCGGGG CCAGTCCGCA GAGTTATGCG
CAGTTGGAGC AGATACTCAA TGGGCAGGCT TACATGATGT CGACGGTTGA TTACTTCACC
TTGATGAGCT GGGTGTTTGC CGGGTTGATT CTGCTGGTGT GGTTCGCCAA GCCACCCTTT
ACGGCCAAGG CGGGCCCGGC ATCGGCGGGG CATTGA
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| Protein sequence | MSNNAAAQFT PPSLLLTTIG LSLATFMQVL DTTIANVALP TISGNLGVSY EQGTWVITSF
AVSNAIALPL TGWLSRRFGE VKLFIWATLL FVLASFLCGI AQSMPELVGF RVLQGVVAGP
LYPMTQTLLI AVYPPAKRGM ALALLAMVTV VAPIAGPILG GWITDSYSWP WIFFINVPIG
LFAAAVVRQQ MRTRPVVTSR QPMDYIGLLT LIIGVGALQV VLDKGNDLDW FESSFIIVGS
LVSLVFLAVF VIWELTDRHP VVNLRLFVHR NFRIGTIVLV GGYAGFFGIN LILPQWLQTQ
MGYTATWAGL AVAPIGLLPV IMSPFVGKYA HRFDLRVLAG LAFLAIGTSC YMRAGFTSEV
DFQHVALVQL FMGIGVALFF MPTLSILLSD LPPHQIADGS GLATFLRTLG GSFAASLTTW
IWIRRADQHH AYLSEHISQF DPTTRHTLEQ LGGASPQSYA QLEQILNGQA YMMSTVDYFT
LMSWVFAGLI LLVWFAKPPF TAKAGPASAG H
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