Gene Pput_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2224 
Symbol 
ID5192469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2530791 
End bp2531264 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID640586681 
ProductMarR family transcriptional regulator 
Protein accessionYP_001267547 
Protein GI148547445 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCATT TTTCTCCCGA GAACTTCCAA ACCTGCGCCA TCGGCATGTT GCTTGGCCGT 
GCTGCGATTC TCAAAGACCG CATTCTTGAC TGGCACCTGG AGTCAGAGGG CGTCACCGCC
GCGCAGTTCA AAGTGCTGAT CATCGTCACC CAGTACCAGG TGGATACCCC GGCCGAACTG
TGCCGTTACC TGGGCCTGGA CAGCGGATCG ATGACCCGCA TGCTCGACCG CCTCGAGCAG
AAGGAGCTGA TCGTGCGCAA CCGCTGCGCC GACGACCGTC GCCAGGTGCG CCTGGCACTC
ACCGCCGACG GCCAGCGCCT GGCCAACCGC CTACCGGAAA TTGGCGCCGC CGCCATGAAC
GAGTTGTGCG GCGTGCTGGC ACCAGAGGAG CTCAAGACCC TGGAAGGCCT GCTGGCCAAG
GTGCTGCTCG GTGCTGGCGA CCCGTTGACG ATCCGCCGCT TCGGCGACCG TTGA
 
Protein sequence
MAHFSPENFQ TCAIGMLLGR AAILKDRILD WHLESEGVTA AQFKVLIIVT QYQVDTPAEL 
CRYLGLDSGS MTRMLDRLEQ KELIVRNRCA DDRRQVRLAL TADGQRLANR LPEIGAAAMN
ELCGVLAPEE LKTLEGLLAK VLLGAGDPLT IRRFGDR