Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2221 |
Symbol | |
ID | 5192435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2526746 |
End bp | 2528368 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586678 |
Product | acyl-CoA synthetase |
Protein accession | YP_001267544 |
Protein GI | 148547442 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCT ATGCCCAGGG CCTGATGCCC GCTGCCGTCA ACCATGTCGC CCTCACCCCG CTGAGCTTCA TCGAACGCAC CGCTGCCGTG TACGGCAACT ACCCGGCCGT CATCCACGGC GCCATCCGCC GCAACTGGCA AGAAACCTAC CAACGCTGTC GGCGCCTGGC CAGCGCCCTG GCCGGTCGTG GCATTGGCCG TGGCGACACC GTGGCAGTGA TGCTGCCCAA CACCCCGACC ATGCTCGAGG CGCACTTCGG CGTACCCATG ACCGGTGCCG TGCTCAATAC CCTGAACGTG CGCCTGGATG CCGAGGCCAT CGCCTTCATG CTGCAGCATG GCGAGGCCAA AGTGCTGATC ACCGACCGCG AGTTCCATGC GGTCATCGAA GGCGCTCTGG CACTGCTTGA ACACCCGCCG CTGGTGGTTG ATGTGGATGA CCCAGAGTAC GGCGAAGGCC GCGCGGTCAG CCAGCTGGAC TATGAGGCCC TGCTCAACGA AGGCGACCCG GAATTTGCCT GGGAATGGCC CGATGACGAG TGGCAGGCCA TATCGCTGAA CTACACCTCC GGCACCACCG GCAACCCCAA GGGCGTGGTC TACCACCACC GTGGTGCCTA CCTGAACGCC CTGGGCAACC AGATGACCTG GGCCATGGGC CACCGCCCGG TGTACCTGTG GACGTTGCCG ATGTTCCACT GCAACGGCTG GTGCTACCCC TGGACCATCA CCGCCCTGGC CGGCACCCAT GTGTTCCTGC GCCGGGTCGA CCCGCAGAAG ATCCTGACCC TGATCCGCGA GCACAAAGTC AGCCACCTGT GCGGTGCGCC GATCGTGCTC AACGCGCTGG TCAACATGCC CGAGGCGGCC AAGGCAGCCA TCGAGCACCC GGTGCAGGCC ATGGTCGCCG GCGCCGCTCC ACCGGCCAAG GTCATCGGCG CCGTGGAAGA AATGGGCATC AAGGTCACCC ACACCTACGG CCTGACCGAG GTTTATGGCC CGGTGACCGT GTGTGCCTGG CATGACGAAT GGGACGCGCT TTCGCTGGAG GAGCGTGCAC GCATCAAGTC TCGCCAAGGC GTGCGCTACC CGACCCTCGA TGGCCTGATG GTCGCCGACC CGCAAACCCT TCAGCCAGTA CCCCGCGACG GCAATACCCT GGGCGAAATC TTCATGCGCG GCAACACGGT GATGAAGGGT TACCTGAAAA ACCCTGAAGC CACCGCCGAA GCCTTCCGTG GCGGCTGGTT CCACACCGGC GACCTGGCCG TGTGGCATGC CGACGGCTAT ATCGAGATCA AGGACCGGCT CAAGGACATC ATCATTTCCG GTGGCGAAAA CATCTCCACC ATCGAGGTCG AAGACGCCCT GTACAAGCAC CCGGCAGTGC TGGAAGCCGC CGTGGTGGCA CGCCCGGATG AAAAATGGGG GGAAACCCCG TGCGCCTTCG TTGCCCTGAA GCCGGGCCGA GAGGACACCC GTGAAGCCGA CATCACCAGT TGGTGCCGCG AGCACCTGGC CGGGTTCAAG GTGCCGAAGA CCGTGGTGTT CGGCGAGCTG CCCAAGACCT CGACCGGCAA GATCCAGAAG TACGTGCTGC GCGACCGGGC CAAGGCCCTC TGA
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Protein sequence | MSIYAQGLMP AAVNHVALTP LSFIERTAAV YGNYPAVIHG AIRRNWQETY QRCRRLASAL AGRGIGRGDT VAVMLPNTPT MLEAHFGVPM TGAVLNTLNV RLDAEAIAFM LQHGEAKVLI TDREFHAVIE GALALLEHPP LVVDVDDPEY GEGRAVSQLD YEALLNEGDP EFAWEWPDDE WQAISLNYTS GTTGNPKGVV YHHRGAYLNA LGNQMTWAMG HRPVYLWTLP MFHCNGWCYP WTITALAGTH VFLRRVDPQK ILTLIREHKV SHLCGAPIVL NALVNMPEAA KAAIEHPVQA MVAGAAPPAK VIGAVEEMGI KVTHTYGLTE VYGPVTVCAW HDEWDALSLE ERARIKSRQG VRYPTLDGLM VADPQTLQPV PRDGNTLGEI FMRGNTVMKG YLKNPEATAE AFRGGWFHTG DLAVWHADGY IEIKDRLKDI IISGGENIST IEVEDALYKH PAVLEAAVVA RPDEKWGETP CAFVALKPGR EDTREADITS WCREHLAGFK VPKTVVFGEL PKTSTGKIQK YVLRDRAKAL
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